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Testing Blocker Tickets

None

Resources

RC-1

  1. Link to RC-1 war file
  2. Link to RC-1 Docker container

Testing Plan

New Installation Tests

  1. Remove application data

    rm -rf ${VIVO_HOME}/tdbModels/
rm -rf ${VIVO_HOME}/tdbContentModels/
rm -rf ${VIVO_HOME}/rdf/

  2. Start Tomcat

    sudo systemctl start tomcat9.service

UI Tests 

Note these are run manually, it might be possible to reconcile these test with this automated test suite : https://github.com/vivo-community/vivo-acceptance-tests


TestPlatformTested bySuccess?Notes
1

Smoke tests do not produce error

(warning about email server is OK)

Mac

Linux

Windows




2

Home page displays correctly

Mac

Linux

Win/Lnx

Windows




3Log in as admin

Mac

Linux

Win/Lnx

Windows




4Site Admin page displays correctly

Mac

Linux

Win/Lnx




5Each function on site admin display correctly

Mac

Linux

Win/Lnx

Windows



All 24 links (including Data Input Pull down) display normally. Ontology list All looks good
6

Site Admin - Add Individual of this class:

Faculty Member (People)

Project (Activities)

Course (Courses)

Academic Article (Research)

Presentation (Events)

Academic Department (Organizations)

Populated Place (Locations)

Mac

Linux

Win/Lnx

Windows



Creation of a FacultyMember without a middle name results in extra whitespace attached to the end of rdfs:label value. 

The default list view for publications doesn't show the issue number for articles, which seems weird, but it appears to have been this way since at least 1.9 (as with the rds:label bug above).

7Check required fields in creating classes

Mac

Linux

Win/Lnx 

Windows




8

Check menu entries

(Home, People, Organizations, Events, Capability Map)

Mac

Linux

Win/Lnx

Windows




9

Check Person display

(logged out, logged in)

Mac

Linux

Windows




10Add values to all Person attributesMac

All is a heavy lift. 64 attributes accessible from the person page, some of which lead to entities (publications, positions, etc)) each with their own attributes.

Recommended: Add photo, overview, URL, research areas, position. Each exercises different functionality.

11Add research areas using vocabulary servicesMac

UMLS service requires registration key. See Release Notes. Unclear where this key would go. Other services respond as expected.
12

Check tabs on Person display

(overview, publications, contact, etc.)

Mac

Linux

Win/Lnx




13

Add new publication to person

(check required fields)

Mac

Linux

Win/Lnx




14Check publication sparklineMac


15

Check manage publications

(hide / show publications)

Mac

Linux




16

Check Publication view

Mac

Linux

Win/Lnx




17

Check AltMetric badge

(e.g. doi: 10.1038/nrmicro2331)

Mac

Win/Lnx



Poor UI experience. I copied in the link, which copied in the HTML tagging, which led to showing the HTML tagging in the display. The edit form is open ended HTML, should be plain text. Should indicate what form of DOI is expected , or should accept with or without http:// without without "doi".
18Add author(s) to publication

Mac

Linux

Win/Lnx




19Check Person has co-author network

Mac

Linux

Win/Lnx




20Check co-author network display

Mac

Linux

Win/Lnx




21Add grants to Person

Mac

Linux

Win/Lnx




22Add co-investigators to grants

Mac

Linux

Win/Lnx




23Check Person has co-investigator network

Mac

Linux

Win/Lnx




24Check co-investigator network display

Mac

Linux

Win/Lnx




25Load Sample Data

Mac

Linux




26Check Capability Map

Mac

Linux



Need more sample data with more concepts for more extensive tests.
27Check Map of Science

Mac


Win/Lnx




28Check Temporal Graph

Mac

Linux




29Search for "Derrida"

Mac

Linux




30Check index page

Mac

Linux

Win/Lnx




31Create self editor login associated with profile

Mac

Linux



See Creating and Managing User Accounts#AssociatingUserAccountswithProfilePages
32Log in as self editor. Verify can edit self, cannot edit others.

Mac

Linux




33Add and confirm an ORCiD

Mac

Linux



ORCiD API configuration requires clientId and clientPassword and public VIVO. See Activating the ORCID integration
34Create editor and assign proxy editing

Mac

Windows



Created user account with editor role and assigned proxy editing.  Also switched to self-editor role.
35Log in as proxy editor. Verify can edit proxied profile, cannot edit others.

Mac

Windows



When logged in as self-editor designated as a proxy editor, I can only edit the proxied profile and not a different profile.  When logged in as editor (i.e. the editor role which is different from self-editor), I can edit the proxied profile but also other profiles. Works as it should.
36

Check TPF endpoint

(enable if necessary)

Mac

Linux

Windows



Works as designed. 45,279 triples with VIVO data, sample data, and some manually entered test data. Design needs work.

/tpf/core displayed triples and enabled triple pattern matching by subject,predicate, or object.  (43,173 triples in total)

37Run a SPARQL query

Mac

Linux

Windows



curl -i -d 'email=vivo_root@mydomain.edu' -d 'password=xxx' -d 'query=SELECT ?p ?o WHERE {<http://vivoweb.org/ontology/core#FacultyMember> ?p ?o} LIMIT 5' -H 'Accept: application/sparql-results+json' 'http://localhost:8080/vivo/api/sparqlQuery'

API Tests (reference: VIVO APIs)


TestPlatformTested bySuccess?Notes
1

Linked Open Data

Linux

# From Site Admin: Create a new `Faculty Member` (Add individual)
** Record the new URI: http://localhost:8080/vivo/individual/n1323
# Verify `individual` endpoint:

curl http://localhost:8080/vivo/individual/n1323/n1323.ttl
curl http://localhost:8080/vivo/individual/n1323/n1323.n3
curl http://localhost:8080/vivo/individual/n1323 -L -H "Accept: text/turtle"

ListRDFLinux

curl http://localhost:8080/vivo/listrdf -d 'vclass=http://vivoweb.org/ontology/core#Continent'

curl http://localhost:8080/vivo/listrdf -d vclass=http://vivoweb.org/ontology/core#Continent

3

Triple Pattern Fragments

http://localhost:8080/vivo/tpf/core

http://localhost:8080/vivo/tpf

curl http://localhost:8080/vivo/tpf/core

Linux

# Verify browsing:
http://localhost:8080/vivo/tpf/core
http://localhost:8080/vivo/tpf

Minor observation:  When TPF is disabled, it's great that the exception thrown explains how to enable it, but returning a 500 code with a stacktrace doesn't necessarily seem like the most graceful way of handling the situation.  I might expect a 404 (TPF server simply doesn't exist on the site) or maybe a 501? (Request is valid, but functionality is not implemented.)  The 500/stacktrace suggests to me that something is wrong with my installation.

# Verify direct access:
curl http://localhost:8080/vivo/tpf/core?subject=http://localhost:8080/vivo/individual/n1323

4SPARQL Query API

Linux

Windows



5SPARQL Update API

Linux

Windows




API works.  In the course of loading approx. 90K triples via the API, this search index-related warning appeared in the log a handful of times: 2019-09-26 16:26:39,453 WARN [ConcurrentUpdateSolrClient] No more runners, but queue still has 1 adding more runners to process remaining requests on queue

6Search Indexing APILinux

This works in the UI, but unable to get "curl" to work. Using:

curl -i -XPOST -d 'email=vivo_root@mydomain.edu' -d 'password=xxx' -d 'datafile=@uriList.txt' 'http://localhost:8080/vivo/searchService/updateUrisInSearch'


See: Search indexing service

7Data Distribution API

macOs

Linux



Did not work following instructions for 1.10. Changing the DDAPI version from 1.1 to 1.1.1 DID work. Following instructions for building a snapshot version, which involved adding a repository tag, also worked. 

Pull request submitted to DDAPI repo to update documentation: https://github.com/vivo-community/vivo-data-distribution-api/pull/9

8Direct2Experts API

Linux

Mac




9Json-ld and rdf/xml individual pages



Unload/Load Tests


TestPlatformTested bySuccess?Notes
1Load data using the HarvesterLinux


2

Unload using jena2tools -e

(using jena3tools -e Andrew Woods )

Windows | Linux


3Load using jena3tools -iWindows | Linux


4Load sample data to a named graphWindows | Linux


5Remove sample data named graphWindows | Linux


Triplestores Tests


TestPlatformTested bySuccess?Notes
1SDB



2TDBWindows


3BlazeGraph



Upgrade Tests

  1. Install previous release
  2. Prepare installation per instructions above for previous release
  3. Start Tomcat - check that smoke test passes
  4. Stop Tomcat

  5. Export data with jena2tools

    java -jar jena2tools.jar -e -d /usr/local/vivo/home
  6. Replace war file in tomcat/webapps with release-candidate webapp
  7. Start Tomcat

  8. Verify application per `UI Tests` above

    TestPlatformTested bySuccess?Notes
    All UI TestsWindows | Linux


    All API TestsWindows | Linux


    All Unload/Load testsWindows | Linux


    All performance tests



Performance Tests

Performance tests should compare run times for a 1.11 vs a 1.12 on same hardware, same data.
Timing collection may be facilitated by enabling The Developer Panel.


TestPlatformTested bySuccess?Notes
1Compare firsttime starttime timeLinux | Mac | Windows


2Compare performance data load time



3Compare profile display time



4Compare SPARQL query time



5Compare Search Index rebuild time



6Compare Inferencer rebuild time



7Compare jenatools export time



8Compare jenatoools import time



9Compare Data Distribution API response time



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