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VIVO may be hosted on one or more physical servers, on virtual servers, or in the cloud.

Dual virtual server example (Cornell)

Sitephysical/virtual/cloudapp/db/bothcoresGHzcachememoryOSstorage
Cornellvirtual (local)VIVO, HTTPD, Tomcat22.6712 MB16GB64b RHEL< 150 GB
Cornellvirtual (local)MySQL22.6712 MB8 GB64b RHEL< 150 GB
         
         
         
         

 

MySQL

  • MySQL 14.12 distribution 5.0.95 – very likely the RHEL standard distribution
  • Database size – the largest reported in the 2014 VIVO
  • vivoprod01: HTTPD and Tomcat, 16G of RAM, 2 cores with 2.67 GHz and 12Mb of cache; 64b Red Hat Enterprise Linux
  • vivoprod02: MySQL, 8G of RAM, 2 cores with 2.67 GHz and 12Mb of cache; 64b Red Hat Enterprise Linux
  • Both servers need only the minimum level of storage provided for virtual server configurations at Cornell (150 Gb)
  • The largest database reported in the 2014 Annual Survey was ~5 GB (10+ million rows in the SDB quads table in MySQL)

MySQL

  • MySQL 14.12 distribution 5.0.95 – very likely the RHEL standard distribution

Tomcat

  • version: 7
  • sample server.xml
  • setting memory parameters
  • other Java Servlet containers in use
    • Glassfish (1 reported)

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