Individual Institution Information
Institution |
Cornell |
Indiana |
Ponce |
Scripps |
UF |
Weill |
WUSTL |
Size (# of people) |
~5000 faculty |
~2300 faculty, 40,000 students (IU Bloomington only) |
411 faculty, 622 students |
~2996 |
~4500 faculty, ~51,000 students |
~5000
|
|
|
~12K |
|
not sure. under discussion |
~7 affiliates, |
|
~50 affiliates |
|
Scope (academic depts?) |
Cross discipline, faculty, researchers, grad students (under discussion) |
Under discussion |
Four programs (MD, Biomedical Doctorate, Public Health, Psychology) |
Faculty, ~254 |
15 departments | Faculty, ( other groups still under discussion), 16 colleges, 124 departments | Faculty,
Med and grad students
? research staff | |
Nature of Institution |
Mixed private and state, land grant, research |
Public research university |
private, non-profit |
Private non-profit |
|||
All Data Sources |
HR: LDAP Grants: OSP | HR: PeopleSoft, Courses: Sakai, |
OSRPP, Human Resources, MIS, Academic Affairs |
MySQL database |
HR: PeopleSoft EndNote Web Grants: DSR |
HR: SAP |
HR: PeopleSoft |
|
Technical Environment |
Redhat Linux, Apache, Tomcat, Java, MySQL, CUWebAuth |
Linux/Intel, Apache, Tomcat, Java, MySQL |
Windows |
Linux, Windows, Sun/Solaris |
Linux |
Java, Jira, LDAP/AD, Nexus, source safe, sub-version, cold fusion, oracle, MSSQL, windows, AIX, Solaris, ... |
Linux |
Authentication |
Kerberos |
CAS, Kerberos |
Active Directory |
LDAP, Active Directory, Shibboleth |
Shibboleth |
LDAP, Active Directory |
|
System Environment by Site
Institution |
|
|||||||
Cornell (Developers) |
1 production, several development and test servers in department |
Physical |
- Production
- Development
- Test | RHEL 5+ | 6+ | 5+ | http://vivo.cornell.edu | Pre-NIH grant |
Indiana
3
Virtual
- Production
- Staging
- Development | RHEL 5.6 | 6 | 5.0.77 | http://vivo.iu.edu | 02/11/10 |
Ponce
2
Virtual
- Production
- Test | Windows Server 2008 R2 | 6 | 5 | http://vivo.psm.edu | 02/10/10 |
Scripps
2
Virtual
- Production
- Test | Linux CentOS 5.4 64-bit | 6.0.26 | 5.0.77 | http://vivo.scripps.edu
http://vivotest.scripps.edu | 02/08/10 |UF
3; separate mysql databases for each
Virtual
- Production
- Staging
- Development
Debian Squeeze
6.0
5.1.49
2/16/10
Weill Cornell
2
Virtual
Prod, test
Solaris
5.5.27
5.x?
3/3/10
WUSTL
2
- QA
- production | CentOS 5.4 | | | http://vivo.wustl.edu | 2/18/10 |
Data By Site
Institution |
Data Collection Update |
Organizational Data |
People/HR Data |
Grant Data |
Publications |
CV's |
BioSketchs |
Local Public Data (local repositories) |
Cornell (updated 3/1/2011) |
New processes for: LDAP (HR), Registrar (courses), OSP warehouse (Grants), Activity insight Still exists |
Updated (existed before the grant) |
ingested, up-to-date |
Prod: 11,724
Test: 55, 927 | ingested, old data in, new ingest in test, will move to prod very soon.
Prod: 3,359
Test: 28,325 | We have the deprecated text fields and some linked data. Working on getting harvester to work with pub med. Activity Insight publications (30K) in test, will move to prod very soon.Academic articles
Prod: 2,043
Test: 29,355 | Students and administrative staff help out with CV input, but we don't have a system like UF. | no | No institutional repository but in discussion for eCommons. |
Indiana |
Summary:We have 2.5K+ IUB faculty in our production instance. This includes people/HR data, course/teaching data, and organization data ingested from our data warehouse.
Next up is expansion to include faculty on IU's other campuses, with IUPUI being the next source to tackle.
Work is currently being done to import about 55 profiles with richer data from the Networks and Complex Systems Research VIVO instance at IU.
Collaboration is underway with the CTSI Hub. We have shared basic VIVO profile data for IUPUI campus faculty to seed Hub profiles. Work on collecting research interest data via the Hub and importing into VIVO is in progress.
Collaboration is underway with the Pervasive Technology Institute. We have their publication data set and are waiting for the next release of the Harvester to use its MOD XML ingest abilities on this data. | IU's data warehouse. Different areas of data are controlled by data managers, who grant access to the data in their area. Access to the data is distinct from permission to publicly publish it to VIVO.
Various other local data stores (e.g. CTSI Hub, PTI publications data, possibly the IUPUI Medical School faculty reporting system) |
Ponce |
Collected data from Active Directory, HR Database, OSRPP office, internal web pages, pubmed and NIH Reporter |
manually entered |
Data Ingested from an exported of Active Directory |
Some data entered manually |
Testing harvester on test instance. Some data entered manually on production |
Data Colected from OSRPP Office and faculty web pages and manually entered |
Data Collected from OSRPP office and Faculty web pages and manually entered |
Data entered Manually |
Scripps |
Collected data from HR files, existing web profiles and publication data from PubMed. |
02/12/10 Data manually entered on test server and copied to production server |
02/12/10 manually entered on test server and copied to production server |
sample data entered |
sample data entered; will ingest at the institutional level upon release of the PubMed ingest procedure |
sample data entered for showcase department; educational data manually entered from faculty web profiles |
no |
n/a: No institutional repository |
UF |
Collected HR data from Enterprise Reporting (PeopleSoft), |
manually curated and updated. We will be doing an ingest in the near future - to include all dept IDs. |
Ingested using harvester .7. Currently in process of refreshing with 1.0 |
ingested using .7. currently refreshing with .7. |
PubMed ingest using .7. Refresh in process with 1.0. |
phase I (health science) departments completed. phase II (sciences and liberal arts) beginning. |
One 'showcase' department only has biosketchs (no CVs) |
not yet |
Weill Cornell |
Continuing with examination of data sources. Already collected some researcher and faculty data from People, OFA, POPS (internal WCMC system data sources). Pending approval to collect teaching data from Angel and people data from SAP. |
Originally manually entered. Will be replaced by database driven data. Once pass the test stage, will use Harvester for data ingest in production. |
Acquired. Currently in test stage to ingest name, position, biography using Harvester. Will continue with education background, research overview, service, address. Once pass the test stage, will use Harvester for data ingest in production. |
Some grant data added using the Advanced Data Tools of the VIVO interface. Will be ingested using Harvester after passing the test stage. Currently examining the data from Coeus. |
Will use Harvester for ingest. Tested ingest on test site. |
not yet |
not yet |
not yet |
WUSTL |
will upload data into production once every 8 weeks. |
manually entered |
Programmatically ingested for all faculty members for which we have permission (>50% effort). |
Ingested data from NIH Reporter, however there are a few issues. Our group has the WUSM grant data, but we are acquiring permission to use it as well as receive grant abstracts. |
Programmatically ingested from PubMed (>32K articles) |
Two departments/divisions entered, two Centers. |
Requested from all departments and divisions. Will work on a script to programmatically ingest the data. |
not yet |