Date
Call-in Information
Time: 10:00 am, Eastern Daylight Time, or 4:00 pm, Central European Summer Time
Join Zoom Meeting
https://lyrasis.zoom.us/j/81398228834?pwd=SE0wdFN3NnFVbEhYVUhuM3BtQmVUQT09Meeting ID: 813 9822 8834
Passcode: 728426- calendar invitation - ics
Attendees
Indicating note-taker
Agenda
- CRIS 2024
- Dynamic API
- VIVO-community repositories (VIVO-Harvester)
- ElasticSearch vs Solr
- Upload image issue
- Anyone having trouble with image uploads with recent versions of VIVO? I'm getting these errors in the logs:
2024-05-13 19:09:33,509 ERROR [FileInfo] File had no filename: 'https://researchers.mydomain.edu/individual/n23090'
2024-05-13 19:09:33,510 INFO [FileServingServlet] Failed to serve the file at '/file/n50145/thumbnail_totoro.jpg' -- edu.cornell.mannlib.vitro.webapp.filestorage.serving.FileServingServlet$FileServingException: The request path is not valid for the File servlet: '/file/n50145/thumbnail_totoro.jpg'Images work if I'm logged in as an admin and do a hard refresh, otherwise they appear broken.
- Anyone having trouble with image uploads with recent versions of VIVO? I'm getting these errors in the logs:
- VIVO 1.15.0
- Recently Merged
- Update pull request template
- Update freemarker version
- Object property statement can't be hidden from display without hiding all property statements in individual profile
- https://github.com/vivo-project/Vitro/pull/451
- William added a couple of comments, Georgy fixed that
- Sparql query data getter invalid substitution errors appear in log files
- https://github.com/vivo-project/Vitro/pull/459
- Georgy, Dragan
- Profile linking with Matching ID doesn't work
- Added zero minutes/seconds select options on date interval form
- https://github.com/vivo-project/Vitro/pull/461
- Georgy, Dragan
- Google image charts API not working anymore
- Remove string literals from configuration graphs results in error
- https://github.com/vivo-project/Vitro/pull/462
- Georgy, Dragan
- Update Readme file with join the community section
- Menu pages can't be modified
- https://github.com/vivo-project/Vitro/pull/452
- Georgy,
BrianBenjamin, Dragan
- Self editor display permission is being removed on edit of property
- https://github.com/vivo-project/Vitro/pull/466
- Georgy, Dragan, tiny PR
- ??? I forgot my password ???
- https://github.com/vivo-project/VIVO/pull/3916
- https://github.com/vivo-project/Vitro/pull/421
- Ivan, Georgy, Dragan, Native speakers
- Ready for merging
- TinyMCE
- https://github.com/vivo-project/Vitro/pull/454
- https://github.com/vivo-project/VIVO/pull/3971
- wait for the PR - Menu pages can't be modified (https://github.com/vivo-project/Vitro/pull/452)
- Milos feedback
- Added search results sort fallback
- https://github.com/vivo-project/Vitro/pull/456
- Georgy, Milos, Dragan
- TinyMCE
- Active
- Role based search filters
- https://github.com/vivo-project/Vitro/pull/442
- Georgy, William, Dragan
- SPARQL authorization cache
- https://github.com/vivo-project/Vitro/pull/450
- Georgy, Brian, Dragan
- Wilma responsive theme
- https://github.com/vivo-project/Vitro/pull/460
- https://github.com/vivo-project/VIVO/pull/3972
- Milos, Georgy, Bridget, Benjamin
- Improving efficiency of removing blank statements
- https://github.com/vivo-project/Vitro/pull/463
- Georgy, Dragan, Brian
- Blocker for VIVO 1.14.3 RC 2
- Local fonts
- https://github.com/vivo-project/VIVO/pull/3983
- https://github.com/vivo-project/Vitro/pull/465
- Georgy, Dragan, tiny PR
- Update jquery (webjars)
- https://github.com/vivo-project/Vitro/pull/464/
- Georgy, Dragan, WIlliam
- blocker for Local fonts (https://github.com/vivo-project/VIVO/pull/3983, https://github.com/vivo-project/Vitro/pull/465)
- Role based search filters
- Postponed
- Avoid lock on graph uri update in RdfServiceSparql
- https://github.com/vivo-project/Vitro/pull/424
- Might be postponed for VIVO 1.16.0?
- robots.txt
- https://github.com/vivo-project/VIVO/pull/3936
- https://github.com/vivo-project/Vitro/pull/438
- After merging I forgot my password
- Replace qtip dependency
- https://github.com/vivo-project/VIVO/pull/3937
- https://github.com/vivo-project/Vitro/pull/439
- After reopening and fixing responsive wilma PR
- Update jquery
- https://github.com/vivo-project/VIVO/pull/3955
- https://github.com/vivo-project/Vitro/pull/449
- Split to
- A PR which is adding a newJQuery directory with new library (and keeping old jquery library). This PR can be safely and easily merged in the main branch
- A separated PRs for each theme
- Relocation of slf4j-log4j12
- Contribution
- Avoid lock on graph uri update in RdfServiceSparql
- Recently Merged
- VIVO 1.14.3
Notes
CRIS 2024
Dragan briefly reported about participation in the CRIS 2024 conference. Some conference participants expressed interest in using VIVO (Portugal, Germany, OpenAIRE graph integration).
Dynamic API
There are some concerns about development of Dynamic API due its complexity and speed of development. There are some alternatives which might produce REST endpoints more efficiently at the moment. However, Dynamic API should also make the VIVO codebase more stable and easier to maintain. Depending on our resources and VIVO vision (and roadmap) which should be published till end of the year, we should make decisions about further development of Dynamic API or using its alternatives for quick reaching some visio goals.
VIVO-community repositories (VIVO-Harvester)
Who is responsible for maintaining projects (repositories) within vivo-community github organization? VIVO committers are not, but if there is some simple PR we can review and approve it. Moreover, if a member of the VIVO community expressed the interest to participate in maintaining some repository we can give him/her privileges. We can grant write permissions to Benjamin Kampe (TIB) for the VIVO-Harvester repository.
ElasticSearch vs Solr
There is an interest in replacing Solr with the ElasticSearch engine in some VIVO instances. There is an implementation for this in VIVO which requires additional testing and improving documentation. Dragan will contact Don Elsborg who might have some knowledge to help in this.
Upload image issue
Georgy will try to reproduce the issue. If the issue is reproducible we will open a GitHub ticket.
I forgot my password
https://github.com/vivo-project/VIVO/pull/3916
https://github.com/vivo-project/Vitro/pull/421
Dragan made a mistake and broke review process rules (merge PR which has been created by a person affiliated with the same institution). Luckily, no one has additional requests for code improvements. Therefore, we decided to keep it merged.
Other PRs
Dragan assigned some PRs to committers for reviewing.
Actions
Previous actions
- All to consider participation in the ORCID-VIVO integration project and express their interest by filling out https://forms.gle/QHsCGy6spqJmP4JL6 till April 24th.
- Dragan Ivanovic to add deprecation note into Virtual Appliance Installation VIVO 1.2 (Windows)
- Brian Lowe to review https://github.com/vivo-project/VIVO/pull/3954
- Brian Lowe to review https://github.com/vivo-project/Vitro/pull/450
- Brian Lowe to review https://github.com/vivo-project/Vitro/pull/424
- William Welling to review https://github.com/vivo-project/Vitro/pull/442
- William Welling to review https://github.com/vivo-project/VIVO/pull/3916, https://github.com/vivo-project/Vitro/pull/421
- Georgy Litvinov to review https://github.com/vivo-project/Vitro/pull/460, https://github.com/vivo-project/VIVO/pull/3972
- Dragan Ivanovic to prepare a release candidate for VIVO 1.14.3 which includes https://github.com/vivo-project/VIVO/pull/3974 and https://github.com/vivo-project/Vitro/pull/462
- Dragan Ivanovic to create google form for expressing of interest to participate in ORCID-VIVO integration project
- Dragan Ivanovic to prepare VIVO 1.14.2 RC-2
- Dragan Ivanovic to push review process by sending messages into #committers and #reviewers channels
- Georgy Litvinov to create revert PRs for wilma responsive PRs
- Dragan Ivanovic to review (and merge if it ok) revert PRs
- Dragan Ivanovic to respond on email in accordance with discussion at this meeting
- Benjamin Gross to split JQuery PR into smaller one (one per theme) once when "Wilma responsive theme" task is completed and merged
- Dragan Ivanovic to discuss merging of simple PRs with only one reviewer in the #committers slack channel
- Dragan Ivanovic to prepare VIVO 1.14.1 release candidate
- Dragan Ivanovic to post a message in the VIVO committers channel about questions from this meeting
- Dragan Ivanovic to align Pull request template with Brian's suggestions
- Dragan Ivanovic to draft CONTRIBUTING.md file
- Dragan Ivanovic to create a new ticket for log4j vulnerability mitigation and to link to https://github.com/vivo-project/Vitro/pull/441
- Georgy Litvinov to draft updates for https://github.com/vivo-project/VIVO/wiki/Development-Processes#process-for-reviewing-contribution
- Dragan Ivanovic to draft updates for PR template
- Dragan Ivanovic to contact Arif regarding opening a ticket (feature request) for home page statistics
- Dragan Ivanovic will inform Ivan about decisions for I forgot my password PR
- Georgy Litvinov to review https://github.com/vivo-project/Vitro/pull/427
- Brian Lowe to review https://github.com/vivo-project/Vitro/pull/424
- Georgy Litvinov to improve https://github.com/vivo-project/Vitro/pull/433 (UI options for defining policies)
- Dragan Ivanovic to work on wiki documentation
- Dragan Ivanovic to contact Ralph O'Flinn about https://github.com/vivo-community/create-wsl2-vivo-dev-env
- Dragan Ivanovic to communicate with the Lyrasis team about adding commenting permissions to anonymous wiki users
- Ivan Mrsulja to implement suggested improvements into https://github.com/vivo-project/Vitro/pull/427
- Georgy Litvinov to improve https://github.com/vivo-project/Vitro/pull/390 in accordance with Miloš Popović review
- Dragan Ivanovic to review https://github.com/vivo-project/Vitro/pull/431
- Dragan Ivanovic to review https://github.com/vivo-project/Vitro/pull/432
- Georgy Litvinov to complete https://github.com/vivo-project/Vitro/pull/433
- Dragan Ivanovic to discuss with Milos Popovic about usage of JQuery in the nemo theme
- Georgy Litvinov to provide Dragan the information about volume size needed for mirroring GitHub into GitLab
- Dragan Ivanovic and Georgy Litvinov to complete merging the ABAC PRs
- Dragan Ivanovic to review extended search PR and Avoid lock on graph uri update in RdfServiceSparql PR
- William Welling will continue working on vivo-solr upgrade branch
- Ivan Mrsulja will consider adding a configuration flag for turning on/off the "I forgot my password" feature
- Dragan Ivanovic to talk with Ivan Mrsulja about improvements of https://github.com/vivo-project/Vitro/pull/421 in accordance with committers' discussion
- Dragan Ivanovic to inform Miloš Popović that bootstrap javascript functions are used in the extended search
- Georgy Litvinov to continue working on ABAC PR and inform us back when it is completed and ready for testing and reviewing
- Dragan Ivanovic to open a GitHub ticket for Mac M1 chip issue
- Dragan Ivanovic to create a PR for upgrading slf4j-log4j12 - https://github.com/vivo-project/Vitro/blob/main/dependencies/pom.xml#L215
- Dragan Ivanovic will open a GitHub ticket for Log4j vulnerability
- Dragan Ivanovic will open a GitHub ticket for Removing trash icon for some specific types
- Dragan Ivanovic will further investigate mirroring GitHub repositories to a self-managed instance of a GitLab platform
- Georgy Litvinov will upgrade https://github.com/vivo-project/Vitro/pull/398
- Dragan Ivanovic should investigate https://github.com/marketplace?category=backup-utilities
- Dragan Ivanovic to prepare VIVO 1.14.0 release
- Dragan Ivanovic to prepare release candidate 4
- Georgy Litvinov to align https://vivo.tib.eu/vivorc/ with release candidate 4
- Dragan Ivanovic to respond to slack messages
- Dragan Ivanovic will try to collect wiki pages where strategy, vision and roadmap for development of VIVO were discussed in the past
- Georgy Litvinov will try to address the issue https://github.com/vivo-project/VIVO/issues/3871
- Dragan Ivanovic will ask Michael to open a GitHub ticket for the issue about UF performance during login (https://vivo-project.slack.com/archives/C8RL9L98A/p1684174222986709), Brian Lowe and others can continue discussion about this issue once a ticket is open
- Dragan Ivanovic will ask Rodrigo to open a GitHub ticket for the issue about custom theme and VIVO Docker (https://vivo-project.slack.com/archives/C8RL9L98A/p1684962021101889), William Welling and others can continue discussion about this issue once a ticket is open
- Brian Lowe to open a GitHub issue for index page exception
- https://github.com/vivo-project/VIVO/issues/3867
- add sample (minimal RDF to reproduce the issue)
- Miloš Popović or Ivan Mrsulja to review (https://github.com/vivo-project/VIVO/issues/3862)
- Georgy Litvinov to review (https://github.com/vivo-project/VIVO/issues/3847)
- Review (https://github.com/vivo-project/VIVO/issues/3865)
- Review (https://github.com/vivo-project/VIVO/issues/3864)
- Review (https://github.com/vivo-project/VIVO/issues/3858)
- Review (https://github.com/vivo-project/VIVO/issues/3859)
- Review (https://github.com/vivo-project/VIVO/issues/3855)
- Review (https://github.com/vivo-project/VIVO/security/dependabot/3)
- Brian Lowe and William Welling to review https://github.com/vivo-project/VIVO/pull/3853
- William Welling to review https://github.com/vivo-project/VIVO/pull/3861
- All to think how to organize scripts for VIVO (at the moment for dump and restore) - https://github.com/vivo-project/Vitro/pull/380
- Dragan Ivanovic to make consultation with the VIVO ontology group and Lyrasis system administrators about non-resolvable VIVO ontology links
- Committers to take part in the sprint PR review process
- Dragan Ivanovic to make a PR for fixing privileges for adding grant collaborators
- Brian Lowe to make a PR for fixing ordering of instances with multilingual properties
- Georgy Litvinov will investigate the problem of searching instances with multilingual properties
- Ralph O'Flinn to help with Preparing Documentation for Release by coping space VIVO 1.12.x Documentation to the space VIVO 1.13.x Documentation (or to grant Dragan Ivanovic permissions to do that)
- Dragan Ivanovic to work on documenting new features for VIVO 1.13.x Documentation
- Dragan Ivanovic to create the third one google form for reporting the testing results, that form should be used for testing new features introduced in VIVO 1.13.0
- Everyone to review https://docs.google.com/forms/d/13W2vynR6OmavoV2Px_kJ-k-dlQDv3ERWG0PnXX7ekQA/edit?usp=sharing and https://docs.google.com/forms/d/1dks3b3sJsmM7Q33bwHW_1iVem5VRjg3fqpx8UTFKIfI/edit?usp=sharing
- Brian Lowe to work on removing spring dependencies (https://github.com/vivo-project/VIVO/issues/3686)
- Georgy Litvinov to work on PR for merging back a lost fix he noticed
- Everyone to review spreadsheet for defining requirements for JS and CSS framework selection - https://docs.google.com/spreadsheets/d/1p-86FdqQR2SpFIsK5Xa-k6Dgm5ORg6Lrc7eeOEetm8g/edit?usp=sharing
- Benjamin Gross to review https://github.com/vivo-project/Vitro/pull/251
- Dragan Ivanovic to review https://github.com/vivo-project/Vitro/pull/251
- Georgy Litvinov to fix the issue with GitHub action https://github.com/vivo-project/Vitro/pull/269
- Ralph O'Flinn to review https://github.com/vivo-project/Vitro/pull/269
- William Welling to review https://github.com/vivo-project/Vitro/pull/269
- Georgy Litvinov to update pom versions in https://github.com/vivo-project/VIVO-languages/pull/104 and https://github.com/vivo-project/Vitro-languages/pull/54
- Dragan Ivanovic to review and merge https://github.com/vivo-project/VIVO-languages/pull/104 and https://github.com/vivo-project/Vitro-languages/pull/54
- Georgy Litvinov to review https://github.com/vivo-project/VIVO/pull/3613
- Dragan Ivanovic to review https://github.com/vivo-project/Vitro/pull/240
- Brian Lowe to review https://github.com/vivo-project/Vitro/pull/240
- Ralph O'Flinn to publish orcid-api-client 0.6.4 and update version of this library at https://github.com/vivo-project/VIVO/blob/main/api/pom.xml#L62
- Dragan Ivanovic to create announcement for the demo meeting and to spread it
- Dragan Ivanovic to reorganize code of https://github.com/vivo-project/Vitro/pull/287 and to get rid of enumerations for data types
- Dragan Ivanovic to investigate organizational (management) aspects of DSpace community and to prepare discussion for the next meeting what might be adopted from there (GitHub actions, labels for issues, template for issue, template for PR)
- William Welling Georgy Litvinov to review sprint PRs (there should be three PRs)
- Brian Lowe to review N3Template operation PR (https://github.com/vivo-project/Vitro/pull/286)
- Georgy Litvinov to review/test https://github.com/vivo-project/orcid-api-client/pull/12
- Ralph O'Flinn to merge https://github.com/vivo-project/orcid-api-client/pull/12 and publish orcid-api-client 0.6.4
- Georgy Litvinov to complete https://github.com/vivo-project/Vitro/pull/251
- Ralph O'Flinn to merge https://github.com/vivo-project/VIVO/pull/3611, after that Georgy Litvinov will create a branch for the sprint and move the code from his fork to there
- Ralph O'Flinn to resolve missing i18n directory issue in VIVO 1.12.2 release
- Georgy Litvinov to work on specification for Dynamic API, Dragan Ivanovic to help Georgy on request
- Ralph O'Flinn to resolve missing i18n directory issue in VIVO 1.12.2 release
- Dragan Ivanovic to find some examples for citation of a GitHub repositories (https://github.com/vivo-project/VIVO/pull/247)
- Georgy Litvinov to contact Tatiana Walther for reviewing https://github.com/vivo-project/VIVO-languages/pull/104 and https://github.com/vivo-project/Vitro-languages/pull/54
- Benjamin Gross to review https://github.com/vivo-project/VIVO/pull/250, https://github.com/vivo-project/Vitro/pull/251, and https://github.com/vivo-project/Vitro-languages/pull/56
- Brian Lowe to review https://github.com/vivo-project/Vitro/pull/213, https://github.com/vivo-project/Vitro-languages/pull/44, https://github.com/vivo-project/Vitro/pull/240, and https://github.com/vivo-project/VIVO-languages/pull/103
- William Welling to review https://github.com/vivo-project/Vitro/pull/241
- Huda Khan to review https://github.com/vivo-project/VIVO/pull/247
