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  • Login as an Administrative user
  • In Sidebase, select "Export" → "Metadata".  Type in the Community/Collection name.
    • Alternatively, browse to the Community or Collection you wish to export, and then go to "Export" → "Metadata".  That Community/Collection will be preselected.
  • Click "Export".  A new Process will be created (in "Processes" menu).  Once completed, download the resulting CSV.
Warningnote
titleExporting search results to CSV was not added until DSpace 7.0 does not yet support all features3

As of In DSpace 7.03, it is not possible to export to CSV based on search results.  This feature existed in 6.x, and it is scheduled to be restored in a later 7.x release (currently 7.1). See DSpace Release 7.0 Status.

Added in DSpace 7.3:

Export search results to a CSV (similar to 6.x).When logged in

possible to Export search results to a CSV (similar to 6.x).When logged in as an Administrator, after performing a search a new "Export search results as CSV" button appears. Clicking it will export the metadata of all items in your search results to a CSV.  This CSV can then be used to perform batch metadata updates (based on the items in your search results). - Release Notes#7.3ReleaseNotes

Please see below documentation for more information on the CSV format and actions that can be performed by editing the CSV.

...

  • First, complete all editing of the CSV and save your changes
  • Login as an Administrative User
  • In sidebar, select "Import" → "Metadata" and drag & drop the CSV file
Warningnote
titleValidate a Batch Metadata CSV was not added until DSpace 7.0 does not yet support all features3

As of In DSpace 7.0, metadata import will occur immediately & results will be reported.  In 6.x, after uploading the CSV, you were first presented with a summary of the changes that were to be performed, allowing you to review and choose whether to apply them or cancel.  This "preview" feature will be restored in a later 7.x release (currently 7.1), see DSpace Release 7.0 Status.

Added in DSpace 7.3:

  • Validate a Batch Metadata CSV before applying changes (similar to 6.x).  When uploading a CSV for batch updates (using "Import" menu), a new "Validate Only" option is selected by default. When selected, the uploaded CSV will only be validated & you'll receive a report of the detected changes in the CSV.  This allows you to verify the changes are correct before applying them.  (NOTE: applying the changes requires re-submitting the CSV with the "Validate Only" option deselected)  - Release Notes#7.3ReleaseNotes

Command Line Import

The following table summarizes the basics.

...

Command used:

...

[dspace]/bin/dspace metadata-import

...

Java class:

...

org.dspace.app.bulkedit.MetadataImport

...

Arguments short and (long) forms:

...

Description

...

-f or --file

...

Required. The filename of the CSV file to load.

...

-s or --silent

...

Silent mode. The import function does not prompt you to make sure you wish to make the changes.

...

-e or --email

...

The email address of the user. This is only required when adding new items.

...

-w or --workflow

...

When adding new items, the program will queue the items up to use the Collection Workflow processes.

...

-n or --notify

...

when adding new items using a workflow, send notification emails.

...

-t or --template

...

When adding new items, use the Collection template, if it exists.

...

-h or --help

...

Display the brief help page.

3, it is now possible to validate a Batch Metadata CSV before applying changes (similar to 6.x).  When uploading a CSV for batch updates (using "Import" menu), a new "Validate Only" option is selected by default. When selected, the uploaded CSV will only be validated & you'll receive a report of the detected changes in the CSV.  This allows you to verify the changes are correct before applying them.  (NOTE: applying the changes requires re-submitting the CSV with the "Validate Only" option deselected)  - Release Notes#7.3ReleaseNotes


Command Line Import

The following table summarizes the basics.

Command used:

[dspace]/bin/dspace metadata-import

Java class:

org.dspace.app.bulkedit.MetadataImport

Arguments short and (long) forms:

Description

-f or --file

Required. The filename of the CSV file to load.

-s or --silent

Silent mode. The import function does not prompt you to make sure you wish to make the changes.

-e or --email

The email address of the user. This is only required when adding new items.

-w or --workflow

When adding new items, the program will queue the items up to use the Collection Workflow processes.

-n or --notify

when adding new items using a workflow, send notification emails.

-t or --template

When adding new items, use the Collection template, if it exists.

-h or --help

Display the brief help page.

Silent Mode should be used carefully. It is possible (and probable) that you can overlay the wrong data and cause irreparable damage to the database.

To run the batch importer, at the command line:

Code Block
[dspace]/bin/dspace metadata-import -f name_of_file.csv

Example

Code Block
[dspace]/bin/dspace metadata-import -f /dImport/col_14.csv

If you are wishing to upload new metadata without bitstreams

Silent Mode should be used carefully. It is possible (and probable) that you can overlay the wrong data and cause irreparable damage to the database.

To run the batch importer, at the command line:

Code Block
[dspace]/bin/dspace metadata-import -f name_of/dImport/new_file.csv

Example

Code Block
[dspace]/bin/dspace metadata-import -f /dImport/col_14.csv

If you are wishing to upload new metadata without bitstreams, at the command line:

Code Block
[dspace]/bin/dspace metadata-import -f /dImport/new_file.csv -e joe@user.com -w -n -t

In the above example we threw in all the arguments. This would add the metadata and engage the workflow, notification, and templates to all be applied to the items that are being added.

CSV Format

The CSV (comma separated values) files that this tool can import and export abide by the RFC4180 CSV format. This means that new lines, and embedded commas can be included by wrapping elements in double quotes. Double quotes can be included by using two double quotes. The code does all this for you, and any good csv editor such as Excel or OpenOffice will comply with this convention.

All CSV files are also in UTF-8 encoding in order to support all languages.

File Structure

The first row of the CSV must define the metadata values that the rest of the CSV represents. The first column must always be "id" which refers to the item's internal database ID. All other columns are optional. The other columns contain the dublin core metadata fields that the data is to reside.

A typical heading row looks like:

Code Block
id,collection,dc.title,dc.contributor,dc.date.issued,etc,etc,etc.
 -e joe@user.com -w -n -t

In the above example we threw in all the arguments. This would add the metadata and engage the workflow, notification, and templates to all be applied to the items that are being added.

CSV Format

The CSV (comma separated values) files that this tool can import and export abide by the RFC4180 CSV format. This means that new lines, and embedded commas can be included by wrapping elements in double quotes. Double quotes can be included by using two double quotes. The code does all this for you, and any good csv editor such as Excel or OpenOffice will comply with this convention.

All CSV files are also in UTF-8 encoding in order to support all languages.

File Structure

The first row of the CSV must define the metadata values that the rest of the CSV represents. The first column must always be "id" which refers to the item's internal database ID. All other columns are optional. The other columns contain the dublin core metadata fields that the data is to reside.

A typical heading row looks like:

Code Block
id,collection,dc.title,dc.contributor,dc.date.issued,etc,etc,etc.

Subsequent rows in the csv file relate to items. A typical row might Subsequent rows in the csv file relate to items. A typical row might look like:

Code Block
350,2292,Item title,"Smith, John",2008

...

  1. Insert a new column. The first row should be the new metadata element. (We will refer to it as the TARGET)
  2. Select the column/rows of the data you wish to change. (We will refer to it as the SOURCE)
  3. Cut and paste this data into the new column (TARGET) you created in Step 1.
  4. Leave the column (SOURCE) you just cut and pasted from empty. Do not delete it.

Common Issues

Metadata values in CSV export seem to have duplicate columns
DSpace responds with "No changes were detected" when CSV is uploaded

Unfortunately, this response may be caused in many ways

  • It's possible the CSV was not saved properly after editing. Check that the edits are in the CSV, and that there were no backend errors in the DSpace logs (which would be an indication of an invalid or corrupted CSV file)
  • Depending on the version of DSpace, you may be encountering this known bug with processing linebreaks in CSV files: https://github.com/DSpace/DSpace/issues/6600
  • If you are setting a new embargo date in the CSV, ensure that the embargo lift date is a future date.  It's been reported that past dates may cause DSpace to ignore item changes.

Batch Editing, Entities and Relationships

Consider the following page for this topic: Configurable Entities

Background about entities and virtual metadata

  • In DSpace 7, we have entities. Entities are items with an entity type (there can still be items without an entity type).

  • Two entities can be linked to each other. For this purpose relations are defined, which indicate the relationship between the entities. Relationships between two entities are defined by the metadata schema relation. The relation reflects how two entities are related to each other, for example isPersonOfProject or isPublicationOfAuthor.

  • Until the introduction of entities, we could only link items to each other by inserting DOIs or URLs of other items into metadata fields dc.relation.*. What is new about the linking between entities in DSpace 7 is that UUIDs are entered into the fields, i.e. internal identifiers of other entities that DSpace can easily resolve. DSpace "knows" which entities are linked to each other and how.

  • On the item view of an entity (remember: an entity is an item with an entity type) metadata of other entities can be displayed. DSpace refers to this as virtual metadata. Virtual metadata does not belong to the item in whose item view it is displayed, but to a linked entity. They can be changed only in the linked entity. As an example: we have the entities journal and journal issue. All journal issues display the title of the journal in their item view. This title is stored only in the journal and is only (dynamically) displayed in the issues.

Admin CSV export

...

Virtual metadata is exported with the entities in which it is included. For example, when you export projects, you see a column for the project.investigator field. This contains values such as <lastname1>, <firstname1>::virtual::8585::600||<lastname2>, <firstname2>::virtual::27946::600. Here, the names of two people have been included as virtual metadata. However, the names are not stored in the project, but exported from the respective person entities at the time of export. The specification ::virtual:: marks this. The specifications ::8585:: and ::27946:: are examples for this documentation and represent IDs of the relations. The specification ::600 comes from the DSpace Authority, which is also specified due to technical circumstances.

  1. the column/rows of the data you wish to change. (We will refer to it as the SOURCE)
  2. Cut and paste this data into the new column (TARGET) you created in Step 1.
  3. Leave the column (SOURCE) you just cut and pasted from empty. Do not delete it.

Common Issues

Metadata values in CSV export seem to have duplicate columns
DSpace responds with "No changes were detected" when CSV is uploaded

Unfortunately, this response may be caused in many ways

  • It's possible the CSV was not saved properly after editing. Check that the edits are in the CSV, and that there were no backend errors in the DSpace logs (which would be an indication of an invalid or corrupted CSV file)
  • Depending on the version of DSpace, you may be encountering this known bug with processing linebreaks in CSV files: https://github.com/DSpace/DSpace/issues/6600
  • If you are setting a new embargo date in the CSV, ensure that the embargo lift date is a future date.  It's been reported that past dates may cause DSpace to ignore item changes.

Batch Editing, Entities and Relationships

Consider the following page for this topic: Configurable Entities

Background about entities and virtual metadata

  • In DSpace 7, we have entities. Entities are items with an entity type (there can still be items without an entity type).

  • Two entities can be linked to each other. For this purpose relations are defined, which indicate the relationship between the entities. Relationships between two entities are defined by the metadata schema relation. The relation reflects how two entities are related to each other, for example isPersonOfProject or isPublicationOfAuthor.

  • Until the introduction of entities, we could only link items to each other by inserting DOIs or URLs of other items into metadata fields dc.relation.*. What is new about the linking between entities in DSpace 7 is that UUIDs are entered into the fields, i.e. internal identifiers of other entities that DSpace can easily resolve. DSpace "knows" which entities are linked to each other and how.

  • On the item view of an entity (remember: an entity is an item with an entity type) metadata of other entities can be displayed. DSpace refers to this as virtual metadata. Virtual metadata does not belong to the item in whose item view it is displayed, but to a linked entity. They can be changed only in the linked entity. As an example: we have the entities journal and journal issue. All journal issues display the title of the journal in their item view. This title is stored only in the journal and is only (dynamically) displayed in the issues.

Admin CSV export

  • Virtual metadata is exported with the entities in which it is included. For example, when you export projects, you see a column for the project.investigator field. Here, the names of two people have been included as virtual metadata. However, the names are not stored in the project, but exported from the respective person entities at the time of export. The specification ::virtual:: marks this. The specifications ::8585:: and ::27946:: are examples for this documentation and represent IDs of the relations. The specification ::600 comes from the DSpace Authority, which is also specified due to technical circumstances.

  • The relation itself is also included in the CSV export, in the relation.isPersonOfProject field. Additionally, a relation.isPersonOfProject.latestForDiscovery field is created. This field has internal reasons in DSpace and should help to make things faster discoverable. In the fields you again see the ::virtual::8585::600 specification, which are already explained above. Instead of the values of individual metadata fields, you now have the UUIDs of the items that are linked. You can always get these UUIDs from the URL of the item view of an item.

An example heading row of the CSV export file (project entity):

Code Block
id,collection,dc.title,project.investigator,relation.isPersonOfProject,etc,etc,etc.

Subsequent example row in the CSV export file (project entity):

Code Block
350,2292,Project title,"Smith, John

...

::virtual::8585::600||

...

Doe, Jane::virtual::27946::600

...

","d89c1eb1-2e7c-4912-a1eb-f27b17fd6848::virtual::8585::600

...

||e3595b14-6937-47b9-b718-1972cb683943::virtual::27946::600"


Admin CSV import

  • As always, only the columns and rows that will be changed should be specified. You do not want to import the columns that contain virtual metadata, because they are not stored in the imported items, but in the linked items. So in the above example you don't want to import the project.investigator column, but delete it from the CSV.

  • To link one item to another you need to create a corresponding column of the relation metadata schema, so in our example above relation.isPersonOfProject. All columns of the form relation.*.latestForDiscovery are created and updated automatically, so you don't want to import them. If you want to create a new relation, of course you don't know the ID of the relation, you can replace it with a +, then DSpace will assign it on its own. For example, a valid new entry in the relation.isPersonOfProject column might then look like this: Of course, people can also be removed from the column or completely new relations can be created for new items, even if there are no old ones to be taken over.

An example heading row for the CSV import file (project entity):

Code Block
id,collection,dc.title,relation.isPersonOfProject,etc,etc,etc.

Subsequent example row for the CSV import file (project entity):

Code Block
350,2292,Project title,"d89c1eb1-2e7c-4912-a1eb-f27b17fd6848::virtual::8585::600||e3595b14-6937-47b9

...

-b718-1972cb683943::virtual::+::600

...

"