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- Dragan Ivanovic
- Brian Lowe
- Georgy Litvinov
- Ivan Mrsulja
- Miloš Popović Santhosh Anand Ramia
- Bridget Almas
- William Welling
- Washington Luís Ribeiro de Carvalho Segundo
- Victor Gabriel Pereira
- Tom Misilo
- Ian SlaterVivian Silva
Agenda
- VIVO 1.15.0 Release Announcement
- VIVO documentation update
- VIVO ORCID grant
- VIVO authentication issue - https://github.com/vivo-project/VIVO/issues/3996
- VIVO - ElasticSearch integration - https://github.com/vivo-project/Vitro/pull/469
- Installation at Debian 12
- package javax.xml.soap does not exist
- Solr docker upgrade - Ian Slater
- Summer mode
- 2nd, 9th, 23rd of July, 6th, 20th, 27th of August
Notes
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VIVO 1.15.0
Dragan discussed the feedback from the test phase, highlighting an issue with the UMLS vocabulary and the need for additional configuration. He also shared that he had prepared a release after resolving the issue (VIVO 1.15.0 Release Announcement) and that there were no known bugs at the time.
VIVO documentation update
Dragan worked on updating wiki documentation and adding new wiki pages for new features introduced in VIVO 1.15.0
https://wiki.lyrasis.org/display/VIVODOC115x/Using+Search
https://wiki.lyrasis.org/display/VIVODOC115x/Authorization
https://wiki.lyrasis.org/display/VIVODOC115x/Editing+Your+Account
https://wiki.lyrasis.org/display/VIVODOC115x/The+VIVO+audit+module
https://wiki.lyrasis.org/display/VIVODOC115x/Private+individual+pages
VIVO ORCID grant
Dragan informed the team about the results of the review process for the VIVO-ORCID integration proposal. Unfortunately, the project has been rejected to be funded, although it got quite a high score (55 out of 56). It is not so clear at the moment what should be improved in the next call for funding. Leadership group should discuss whether we should apply again or not.
VIVO authentication issue
A GitHub ticket has been opened - https://github.com/vivo-project/VIVO/issues/3996
Brian tried to help, but the issue has not yet been resolved. Dragan can try to invite Elvis (the issue reporter) to join the next call.
VIVO - ElasticSearch integration
The pull request has been created, but the review process has not been started - https://github.com/vivo-project/Vitro/pull/469
Probably, the more progress might be after the summer break.
Installation at Debian 12
Dragan is in communication with Jinu (the reporter) and will try to help in the installation.
VIVO and Solr docker upgrade
Ian Slater reported the issue. He is trying to migrate VIVO 1.14 to VIVO 1.15. He tried to migrate data and Solr index. Dragan thinks it is not needed to migrate Solr index, it is enough to migrate data which not require any additional action if the same VIVO_HOME is used in which TDB subdirectories contain data, and after running the new VIVO to log in as system administrator and run reindex (Site admin in the main menu).
Summer mode
We will continue organizing meetings biweekly till August 20th. Plan for meetings:
- 2nd, 9th, 23rd of July, 6th, 20th, 27th of August
Task List
- Dragan Ivanovic to contact Elvis regarding the issue with authentication
- Dragan Ivanovic to try to help Jinu with the installation issue
- Ian Slater will try to upgrade VIVO 1.14.0 to VIVO 1.15.0 and inform the team back in the case there is still some issue
Previous Tasks
- Dragan Ivanovic to investigate the UMLS issue and provide an update on Thursday committers' meeting.
- Bridget Almas to follow up with the Lyrasis hosting team regarding the Vivo demo site and report back. Dragan Ivanovic to investigate data which should be used in demo instance and to check how it might be part of docker.
- Victor Gabriel Pereira to explore using Elastic Search instead of Solr for VIVO's search functionality.
- Dragan Ivanovic to coordinate the VIVO 1.15.0 documentation update
- Ivan Mrsulja to test the Elasticsearch integration with Vivo 1.15.0 using ElasticSearch version 7.0 and provide an update on the testing process in the PR description
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