Web of Science metrics collection is handled by the process hereafter described. To have connection with Web of Science properly working, following configuration properties must be set

metrics.wos.citation-count.url = <wos query url i.e. https://wos-api.clarivate.com/api/wos/?databaseId=WOS&lang=en&usrQuery=>
metrics.wos.citation-count.apiKey = <wos api key>

If last property is the same used to import publications from Web of Science, its value can be “inherited” from ${wos.apiKey}  property already set, in this way

metrics.wos.citation-count.apiKey = ${wos.apiKey}

The updating of publication and researcher metrics from WOS (Web of Science) service is controlled by two processes, which can be run from both processes section and Command Line Interface:

update-metrics wos

updates metrics of type entityType=Publication

update-metrics wos-person

updates metrics of type entityType=Person


The script update-metrics wos applies the following steps to perform the update Publication type metrics:

  1. performs a global search to retrieve all the items of type Publication that have a metadata dc.identifier.doi set.

  2. taking one item at a time - extracts the metadata value from metadata dc.identifier.doi, with these value it constructs the query to be sent to the external WOS service which in turn returns the document containing the metric. 
    a generic answer from WOS can be found here

  3. In th next step, a new metric is created with the data retrieved from wos, such as: 

MetricType

wosCitation

Last

true

MetricCount

87     
( containing in the following path: $.Data.Records.records.REC[0].dynamic_data.citation_related.tc_list.silo_tc.local_count )

AcquisitionDate

date on which the metric was recorded

Remark

this field not defined for this type of metric

In case a previous metric for the given item was already present in our database, its ‘Last’ field is set to ‘false’

The update-metrics wos-person script applies the same sequence of steps,

to retrieve entities of type Person with metadata person.identifier.orcid set

, The response contains n records , one for each publication where one of the authors has  the provided orcid id, the value of this metric is the sum of the individual values contained in each record.

Example:

MetricType

wosPersonCitation

Last

true

MetricCount

2453     

AcquisitionDate

date on which the metric was recorded

Remark

this field not defined for this type of metric

WOS-Metric Body Response Example

{

    "Data": {

        "Records": {

            "records": {

                "REC": [

                    {

                        "UID": "WOS:000544718700031",

                        "static_data": {

                            "summary": {

                                "pub_info": {

                                    "coverdate": "JUL 2020",

                                    "vol": 48,

                                    "pubyear": 2020,

                                    "issue": 7,

                                    "sortdate": "2020-07-01",

                                    "has_abstract": "Y",

                                    "pubmonth": "JUL",

                                    "pubtype": "Journal",

                                    "page": {

                                        "end": 1008,

                                        "begin": 1001,

                                        "page_count": 8,

                                        "content": "1001-1008"

                                    }

                                },

                                "names": {

                                    "count": 6,

                                    "name": [

                                        {

                                            "seq_no": 1,

                                            "role": "author",

                                            "full_name": "Saffaran, Sina",

                                            "addr_no": 1,

                                            "last_name": "Saffaran",

                                            "display_name": "Saffaran, Sina",

                                            "wos_standard": "Saffaran, S",

                                            "daisng_id": 12953931,

                                            "first_name": "Sina"

                                        },

                                        {

                                            "seq_no": 2,

                                            "role": "author",

                                            "full_name": "Das, Anup",

                                            "addr_no": 1,

                                            "last_name": "Das",

                                            "display_name": "Das, Anup",

                                            "wos_standard": "Das, A",

                                            "daisng_id": 4813219,

                                            "first_name": "Anup"

                                        },

                                        {

                                            "seq_no": 3,

                                            "role": "author",

                                            "full_name": "Laffey, John G.",

                                            "addr_no": 2,

                                            "last_name": "Laffey",

                                            "display_name": "Laffey, John G.",

                                            "wos_standard": "Laffey, JG",

                                            "daisng_id": 80745,

                                            "first_name": "John G."

                                        },

                                        {

                                            "seq_no": 4,

                                            "role": "author",

                                            "full_name": "Hardman, Jonathan G.",

                                            "addr_no": 3,

                                            "last_name": "Hardman",

                                            "display_name": "Hardman, Jonathan G.",

                                            "wos_standard": "Hardman, JG",

                                            "daisng_id": 35285335,

                                            "first_name": "Jonathan G."

                                        },

                                        {

                                            "seq_no": 5,

                                            "role": "author",

                                            "full_name": "Yehya, Nadir",

                                            "reprint": "Y",

                                            "addr_no": 4,

                                            "last_name": "Yehya",

                                            "display_name": "Yehya, Nadir",

                                            "wos_standard": "Yehya, N",

                                            "daisng_id": 673390,

                                            "first_name": "Nadir"

                                        },

                                        {

                                            "seq_no": 6,

                                            "role": "author",

                                            "full_name": "Bates, Declan G.",

                                            "addr_no": 1,

                                            "last_name": "Bates",

                                            "display_name": "Bates, Declan G.",

                                            "wos_standard": "Bates, DG",

                                            "daisng_id": 273309,

                                            "first_name": "Declan G."

                                        }

                                    ]

                                },

                                "doctypes": {

                                    "doctype": "Article",

                                    "count": 1

                                },

                                "publishers": {

                                    "publisher": {

                                        "names": {

                                            "count": 1,

                                            "name": {

                                                "seq_no": 1,

                                                "role": "publisher",

                                                "full_name": "LIPPINCOTT WILLIAMS & WILKINS",

                                                "addr_no": 1,

                                                "display_name": "LIPPINCOTT WILLIAMS & WILKINS"

                                            }

                                        },

                                        "address_spec": {

                                            "city": "PHILADELPHIA",

                                            "addr_no": 1,

                                            "full_address": "TWO COMMERCE SQ, 2001 MARKET ST, PHILADELPHIA, PA 19103 USA"

                                        }

                                    }

                                },

                                "EWUID": {

                                    "WUID": {

                                        "coll_id": "WOS"

                                    },

                                    "edition": {

                                        "value": "WOS.SCI"

                                    }

                                },

                                "titles": {

                                    "count": 6,

                                    "title": [

                                        {

                                            "type": "source",

                                            "content": "CRITICAL CARE MEDICINE"

                                        },

                                        {

                                            "type": "source_abbrev",

                                            "content": "CRIT CARE MED"

                                        },

                                        {

                                            "type": "abbrev_iso",

                                            "content": "Crit. Care Med."

                                        },

                                        {

                                            "type": "abbrev_11",

                                            "content": "CRIT CARE M"

                                        },

                                        {

                                            "type": "abbrev_29",

                                            "content": "CRIT CARE MED"

                                        },

                                        {

                                            "type": "item",

                                            "content": "Utility of Driving Pressure and Mechanical Power to Guide Protective Ventilator Settings in Two Cohorts of Adult and Pediatric Patients With Acute Respiratory Distress Syndrome: A Computational Investigation"

                                        }

                                    ]

                                }

                            },

                            "item": {

                                "xsi:type": "itemType_wos",

                                "coll_id": "WOS",

                                "ids": {

                                    "avail": "N",

                                    "content": "ME5TS"

                                },

                                "xmlns:xsi": "http://www.w3.org/2001/XMLSchema-instance",

                                "bib_pagecount": {

                                    "type": "Journal",

                                    "content": 270

                                },

                                "keywords_plus": {

                                    "count": 10,

                                    "keyword": [

                                        "ACUTE LUNG INJURY",

                                        "END-EXPIRATORY PRESSURE",

                                        "TIDAL VOLUME",

                                        "RECRUITMENT MANEUVERS",

                                        "INTENSIVE-CARE",

                                        "HIGH PEEP",

                                        "CHILDREN",

                                        "OXYGENATION",

                                        "MORTALITY",

                                        "SURVIVAL"

                                    ]

                                },

                                "bib_id": "48 (7): 1001-1008 JUL 2020"

                            },

                            "fullrecord_metadata": {

                                "addresses": {

                                    "count": 4,

                                    "address_name": [

                                        {

                                            "names": {

                                                "count": 3,

                                                "name": [

                                                    {

                                                        "seq_no": 1,

                                                        "role": "author",

                                                        "full_name": "Saffaran, Sina",

                                                        "addr_no": 1,

                                                        "last_name": "Saffaran",

                                                        "display_name": "Saffaran, Sina",

                                                        "wos_standard": "Saffaran, S",

                                                        "daisng_id": 12953931,

                                                        "first_name": "Sina"

                                                    },

                                                    {

                                                        "seq_no": 2,

                                                        "role": "author",

                                                        "full_name": "Das, Anup",

                                                        "addr_no": 1,

                                                        "last_name": "Das",

                                                        "display_name": "Das, Anup",

                                                        "wos_standard": "Das, A",

                                                        "daisng_id": 4813219,

                                                        "first_name": "Anup"

                                                    },

                                                    {

                                                        "seq_no": 6,

                                                        "role": "author",

                                                        "full_name": "Bates, Declan G.",

                                                        "addr_no": 1,

                                                        "last_name": "Bates",

                                                        "display_name": "Bates, Declan G.",

                                                        "wos_standard": "Bates, DG",

                                                        "daisng_id": 273309,

                                                        "first_name": "Declan G."

                                                    }

                                                ]

                                            },

                                            "address_spec": {

                                                "country": "England",

                                                "city": "Coventry",

                                                "addr_no": 1,

                                                "organizations": {

                                                    "organization": [

                                                        "Univ Warwick",

                                                        {

                                                            "pref": "Y",

                                                            "content": "University of Warwick"

                                                        }

                                                    ],

                                                    "count": 2

                                                },

                                                "full_address": "Univ Warwick, Sch Engn, Coventry, W Midlands, England",

                                                "state": "W Midlands",

                                                "suborganizations": {

                                                    "count": 1,

                                                    "suborganization": "Sch Engn"

                                                }

                                            }

                                        },

                                        {

                                            "names": {

                                                "count": 1,

                                                "name": {

                                                    "seq_no": 3,

                                                    "role": "author",

                                                    "full_name": "Laffey, John G.",

                                                    "addr_no": 2,

                                                    "last_name": "Laffey",

                                                    "display_name": "Laffey, John G.",

                                                    "wos_standard": "Laffey, JG",

                                                    "daisng_id": 80745,

                                                    "first_name": "John G."

                                                }

                                            },

                                            "address_spec": {

                                                "country": "Ireland",

                                                "city": "Galway",

                                                "addr_no": 2,

                                                "organizations": {

                                                    "organization": [

                                                        "NUI Galway",

                                                        {

                                                            "pref": "Y",

                                                            "content": "National University of Ireland (NUI) Galway"

                                                        }

                                                    ],

                                                    "count": 2

                                                },

                                                "full_address": "NUI Galway, Sch Med, Anaesthesia & Intens Care Med, Galway, Ireland",

                                                "suborganizations": {

                                                    "count": 2,

                                                    "suborganization": [

                                                        "Sch Med",

                                                        "Anaesthesia & Intens Care Med"

                                                    ]

                                                }

                                            }

                                        },

                                        {

                                            "names": {

                                                "count": 1,

                                                "name": {

                                                    "seq_no": 4,

                                                    "role": "author",

                                                    "full_name": "Hardman, Jonathan G.",

                                                    "addr_no": 3,

                                                    "last_name": "Hardman",

                                                    "display_name": "Hardman, Jonathan G.",

                                                    "wos_standard": "Hardman, JG",

                                                    "daisng_id": 35285335,

                                                    "first_name": "Jonathan G."

                                                }

                                            },

                                            "address_spec": {

                                                "country": "England",

                                                "city": "Nottingham",

                                                "addr_no": 3,

                                                "organizations": {

                                                    "organization": [

                                                        "Univ Nottingham",

                                                        {

                                                            "pref": "Y",

                                                            "content": "University of Nottingham"

                                                        }

                                                    ],

                                                    "count": 2

                                                },

                                                "full_address": "Univ Nottingham, Sch Med, Div Clin Neurosci, Anaesthesia & Crit Care, Nottingham, England",

                                                "suborganizations": {

                                                    "count": 3,

                                                    "suborganization": [

                                                        "Sch Med",

                                                        "Div Clin Neurosci",

                                                        "Anaesthesia & Crit Care"

                                                    ]

                                                }

                                            }

                                        },

                                        {

                                            "names": {

                                                "count": 1,

                                                "name": {

                                                    "seq_no": 5,

                                                    "role": "author",

                                                    "full_name": "Yehya, Nadir",

                                                    "reprint": "Y",

                                                    "addr_no": 4,

                                                    "last_name": "Yehya",

                                                    "display_name": "Yehya, Nadir",

                                                    "wos_standard": "Yehya, N",

                                                    "daisng_id": 673390,

                                                    "first_name": "Nadir"

                                                }

                                            },

                                            "address_spec": {

                                                "zip": {

                                                    "location": "AP",

                                                    "content": 19104

                                                },

                                                "country": "USA",

                                                "city": "Philadelphia",

                                                "addr_no": 4,

                                                "organizations": {

                                                    "organization": [

                                                        "Univ Penn",

                                                        {

                                                            "pref": "Y",

                                                            "content": "University of Pennsylvania"

                                                        },

                                                        {

                                                            "pref": "Y",

                                                            "content": "Childrens Hospital of Philadelphia"

                                                        }

                                                    ],

                                                    "count": 3

                                                },

                                                "full_address": "Univ Penn, Childrens Hosp Philadelphia, Dept Anaesthesiol & Crit Care Med, Philadelphia, PA 19104 USA",

                                                "state": "PA",

                                                "suborganizations": {

                                                    "count": 2,

                                                    "suborganization": [

                                                        "Childrens Hosp Philadelphia",

                                                        "Dept Anaesthesiol & Crit Care Med"

                                                    ]

                                                }

                                            }

                                        }

                                    ]

                                },

                                "category_info": {

                                    "subheadings": {

                                        "count": 1,

                                        "subheading": "Life Sciences & Biomedicine"

                                    },

                                    "subjects": {

                                        "subject": [

                                            {

                                                "ascatype": "traditional",

                                                "content": "Critical Care Medicine"

                                            },

                                            {

                                                "ascatype": "extended",

                                                "content": "General & Internal Medicine"

                                            }

                                        ],

                                        "count": 2

                                    },

                                    "headings": {

                                        "heading": "Science & Technology",

                                        "count": 1

                                    }

                                },

                                "normalized_languages": {

                                    "count": 1,

                                    "language": {

                                        "type": "primary",

                                        "content": "English"

                                    }

                                },

                                "languages": {

                                    "count": 1,

                                    "language": {

                                        "type": "primary",

                                        "content": "English"

                                    }

                                },

                                "keywords": {

                                    "count": 6,

                                    "keyword": [

                                        "adult acute respiratory distress syndrome",

                                        "computer simulation",

                                        "mechanical ventilation",

                                        "pediatric acute respiratory distress syndrome",

                                        "protective ventilation",

                                        "ventilator-induced lung injury"

                                    ]

                                },

                                "refs": {

                                    "count": 31

                                },

                                "reprint_addresses": {

                                    "count": 1,

                                    "address_name": {

                                        "names": {

                                            "count": 1,

                                            "name": {

                                                "seq_no": 1,

                                                "role": "author",

                                                "full_name": "Yehya, Nadir",

                                                "reprint": "Y",

                                                "addr_no": 1,

                                                "last_name": "Yehya",

                                                "display_name": "Yehya, Nadir",

                                                "wos_standard": "Yehya, N",

                                                "first_name": "Nadir"

                                            }

                                        },

                                        "address_spec": {

                                            "zip": {

                                                "location": "AP",

                                                "content": 19104

                                            },

                                            "country": "USA",

                                            "city": "Philadelphia",

                                            "addr_no": 1,

                                            "organizations": {

                                                "organization": [

                                                    "Univ Penn",

                                                    {

                                                        "pref": "Y",

                                                        "content": "University of Pennsylvania"

                                                    },

                                                    {

                                                        "pref": "Y",

                                                        "content": "Childrens Hospital of Philadelphia"

                                                    }

                                                ],

                                                "count": 3

                                            },

                                            "full_address": "Univ Penn, Childrens Hosp Philadelphia, Dept Anaesthesiol & Crit Care Med, Philadelphia, PA 19104 USA",

                                            "state": "PA",

                                            "suborganizations": {

                                                "count": 2,

                                                "suborganization": [

                                                    "Childrens Hosp Philadelphia",

                                                    "Dept Anaesthesiol & Crit Care Med"

                                                ]

                                            }

                                        }

                                    }

                                },

                                "abstracts": {

                                    "count": 1,

                                    "abstract": {

                                        "abstract_text": {

                                            "p": "Objectives: Mechanical power and driving pressure have been proposed as indicators, and possibly drivers, of ventilator-induced lung injury. We tested the utility of these different measures as targets to derive maximally protective ventilator settings. Design: A high-fidelity computational simulator was matched to individual patient data and used to identify strategies that minimize driving pressure, mechanical power, and a modified mechanical power that removes the direct linear, positive dependence between mechanical power and positive end-expiratory pressure. Setting: Interdisciplinary Collaboration in Systems Medicine Research Network. Subjects: Data were collected from a prospective observational cohort of pediatric acute respiratory distress syndrome from the Children's Hospital of Philadelphia (n= 77) and from the low tidal volume arm of the Acute Respiratory Distress Syndrome Network tidal volume trial (n= 100). Interventions: Global optimization algorithms evaluated more than 26.7 million changes to ventilator settings (approximately 150,000 per patient) to identify strategies that minimize driving pressure, mechanical power, or modified mechanical power. Measurements and Main Results: Large average reductions in driving pressure (pediatric: 23%, adult: 23%), mechanical power (pediatric: 44%, adult: 66%), and modified mechanical power (pediatric: 61%, adult: 67%) were achievable in both cohorts when oxygenation and ventilation were allowed to vary within prespecified ranges. Reductions in driving pressure (pediatric: 12%, adult: 2%), mechanical power (pediatric: 24%, adult: 46%), and modified mechanical power (pediatric: 44%, adult: 46%) were achievable even when no deterioration in gas exchange was allowed. Minimization of mechanical power and modified mechanical power was achieved by increasing tidal volume and decreasing respiratory rate. In the pediatric cohort, minimum driving pressure was achieved by reducing tidal volume and increasing respiratory rate and positive end-expiratory pressure. The Acute Respiratory Distress Syndrome Network dataset had limited scope for further reducing tidal volume, but driving pressure was still significantly reduced by increasing positive end-expiratory pressure. Conclusions: Our analysis identified different strategies that minimized driving pressure or mechanical power consistently across pediatric and adult datasets. Minimizing standard and alternative formulations of mechanical power led to significant increases in tidal volume. Targeting driving pressure for minimization resulted in ventilator settings that also reduced mechanical power and modified mechanical power, but not vice versa.",

                                            "count": 1

                                        }

                                    }

                                },

                                "fund_ack": {

                                    "grants": {

                                        "count": 4,

                                        "grant": [

                                            {

                                                "grant_agency": "Research Councils UK (RCUK)"

                                            },

                                            {

                                                "grant_ids": {

                                                    "grant_id": "EP/P023444/1",

                                                    "count": 1

                                                },

                                                "grant_agency": "Engineering and Physical Sciences RCUK"

                                            },

                                            {

                                                "grant_agency": "National Heart, Lung, and Blood Institute"

                                            },

                                            {

                                                "grant_ids": {

                                                    "grant_id": "NIH K23 HL-136688",

                                                    "count": 1

                                                },

                                                "grant_agency": "National Institutes of Health (NIH)"

                                            }

                                        ]

                                    },

                                    "fund_text": {

                                        "p": "Drs. Das, Hardman, and Bates received support for article research from the Research Councils UK (RCUK). Drs. Hardman's and Bates's institution received funding from Engineering and Physical Sciences RCUK (Grant Number EP/P023444/1). Dr. Yehya's institution received funding from the National Heart, Lung, and Blood Institute and he received support for article research from the National Institutes of Health (NIH) (Grant Number NIH K23 HL-136688). The remaining authors have disclosed that they do not have any potential conflicts of interest."

                                    }

                                },

                                "normalized_doctypes": {

                                    "doctype": "Article",

                                    "count": 1

                                }

                            }

                        },

                        "r_id_disclaimer": "ResearcherID data provided by Clarivate Analytics",

                        "dynamic_data": {

                            "citation_related": {

                                "tc_list": {

                                    "silo_tc": {

                                        "coll_id": "WOS",

                                        "local_count": 87

                                    }

                                }

                            },

                            "cluster_related": {

                                "identifiers": {

                                    "identifier": [

                                        {

                                            "type": "issn",

                                            "value": "0090-3493"

                                        },

                                        {

                                            "type": "eissn",

                                            "value": "1530-0293"

                                        },

                                        {

                                            "type": "doi",

                                            "value": "10.1097/CCM.0000000000000000"

                                        },

                                        {

                                            "type": "pmid",

                                            "value": "MEDLINE:32574467"

                                        }

                                    ]

                                }

                            }

                        }

                    }

                ]

            }

        }

    },

    "QueryResult": {

        "QueryID": 1,

        "RecordsSearched": 64666906,

        "RecordsFound": 1

    }

}



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