Date

Call-in Information

Time: 10:00 am, Eastern Daylight Time (New York), 4pm Central European Summer Time

To join the online meeting:

  • https://lyrasis.zoom.us/j/84378615572?pwd=bGUxSjlyRTdjOGl5U1B6L0Yva3RQdz09

    Meeting ID: 843 7861 5572
    Passcode: 556561
    One tap mobile
    +16699006833,,84378615572#,,,,*556561# US (San Jose)
    +19292056099,,84378615572#,,,,*556561# US (New York)

    Dial by your location
            +1 669 900 6833 US (San Jose)
            +1 929 205 6099 US (New York)
            +1 253 215 8782 US (Tacoma)
            +1 301 715 8592 US (Washington DC)
            +1 312 626 6799 US (Chicago)
            +1 346 248 7799 US (Houston)
            877 853 5257 US Toll-free
            888 475 4499 US Toll-free
    Meeting ID: 843 7861 5572
    Passcode: 556561
    Find your local number: https://lyrasis.zoom.us/u/kerqtGDrJ4

Calendar invitation - ICS file

Slack

Attendees

(star)  Indicating note-taker

  1. Dragan Ivanovic (star) 
  2. Brian Lowe 
  3. Stefano Pinelli
  4. Georgy Litvinov 
  5. Ivan Mrsulja 
  6. Christian Hauschke 

Agenda

Notes  

Corresponding author - https://github.com/vivo-project/VIVO/issues/3998

Dragan and Brian discussed the issue of supporting a 'corresponding author' flag in their software. Dragan raised the question of whether this feature was important to their clients and whether it should be configurable. Brian confirmed that it was a reasonable feature to include, and that it was already included in the ontology. They agreed that the feature should be supported in the platform, with the default setting being unasserted. The discussion also revealed that this feature was requested by a client (Hanover).

Dockerized VIVO update and vivo-home - https://github.com/vivo-project/VIVO/issues/3997

Georgy opened a ticket. Ivan tried to reproduce the issue. William will probably work on a fix for this. 

Docker images

There is only an image at docker hub with tag latest. Dragan thinks we might consider adding latest-release (or latest-stable) and latest-demo (latest-release+sample data+test user accounts). This might be also further discussed at committers’ meeting. 

Documentation on file upload - https://github.com/vivo-project/VIVO/issues/3991

Markus Kotte requested to add user documentation about uploading files in VIVO (with screenshots if possible). Dragan will work on this. 

Faculty of 1000 link - https://github.com/vivo-project/VIVO/issues/3992

There is some level of uncertainty about url types which should be present in the VIVO ontology. At the moment there is a Faculty of 1000 and URL, but it might be extended in the future with preprints or self-archiving urls. However, the default URL type for the web page faux property modification page is Faculty of 1000 which is confusing. Brian thinks it would be great if we can fix this without waiting for the ontology improvements, but setting URL as the default type. 

Remove filegraph/validation.n3 - https://github.com/vivo-project/VIVO/issues/3993

Dragan sought advice from Brian on potential consequences of this removal and how to investigate any unforeseen issues. Christian identified a property in the Vivo ontology code that does not exist elsewhere and is believed to be an artifact from an old ORCID integration test. Brian agreed that the property, attached to a random individual, seems to be a result of a default namespace collision and recommended removing it.

VIVO slack license 

There will be a paid license for the VIVO workspace in the next 12 months enabling searching messages older than 90 days. There was some temporary issue with the license which was resolved by Lyrasis officers. 

Grants

No news/open calls for grants. 

Summer mode

The summer vacation mode for VIVO is over, meaning the meeting will be organized weekly, every Tuesday at 4pm. You can find the iCalendar file above. 

Draft notes in Google Docs

Task List

Previous Tasks 

  • Dragan Ivanovic to contact Elvis regarding the issue with authentication
  • Dragan Ivanovic to try to help Jinu with the installation issue
  • Ian Slater will try to upgrade VIVO 1.14.0 to VIVO 1.15.0 and inform the team back in the case there is still some issue
  • Dragan Ivanovic  to investigate the UMLS issue and provide an update on Thursday committers' meeting.
  • Bridget Almas to follow up with the Lyrasis hosting team regarding the Vivo demo site and report back. Dragan Ivanovic to investigate data which should be used in demo instance and to check how it might be part of docker. 
  • Victor Gabriel Pereira to explore using Elastic Search instead of Solr for VIVO's search functionality. 
  • Dragan Ivanovic to coordinate the VIVO 1.15.0 documentation update
  • No labels

All content on the LYRASIS Wiki is licensed under the CC BY (Attribution) license, unless otherwise noted.