VIVO Documentation
Page History
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Stefan Wolff, TU Dresden
Rebecca Younes, Cornell
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Issues Resolved
Sub-task
- [VIVO-1476] - Export and provide link of Jena 2 VIVO dataset for testing
Bug
- [VIVO-855] - RDF export not working correctly
- [VIVO-1060] - Add DumpRestoreController to Vitro web.xml
- [VIVO-1310] - pom.xml implies that VIVO develop branch can still run under Java 1.7
- [VIVO-1311] - Remove or replace the UMLS concept source
- [VIVO-1324] - Security vulnerabilties in 1.9.x release
- [VIVO-1342] - Ampersands (and possibly other characters?) not escaped in GraphML export of collaborator network graph
- [VIVO-1394] - AboxRecomputer does not generate correct mostSpecificType for equivalent classes
- [VIVO-1404] - Some SPARQL queries trigger Chrome XSS Auditor
- [VIVO-1435] - Compliance with ORCID style guidelines
- [VIVO-1461] - Assertions are ascribed to Vcard, but terms are not in the Vcard ontology
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- [VIVO-1465] - Jena2tools NullPointerException on read
- [VIVO-1479] - Set version in pom.xml to 1.10.0-SNAPSHOT
- [VIVO-1483] - VIVO hangs on startup after upgrading using jena3tools
- [VIVO-1497] - Overview can not be manually edited
- [VIVO-14511517] - Making Capability Map i18n CompliantJenatools expects package names instead of namespaces
New Feature
- [VIVO-1252] - Incorporate Cornell's DataDistributor API into core Vitro.
- [VIVO-1312] - Implement Linked Data Fragments
- [VIVO-1335] - Create Bootstrap Theme
Story
- [VIVO-1451] - Making Capability Map i18n Compliant
Task
- [VIVO-812] - Automate the process of adjusting documentation to the release
- [VIVO-1316] - Place external lookup base architecture in Vitro layer
- [VIVO-1486] - Update mysql-connector-java dependency in jenatools to 8.0.11
Improvement
- [VIVO-1063] - Update included jQuery library
- [VIVO-1246] - Improve the ConfigurationBeanLoader
- [VIVO-1247] - Remove duplicate code, based on improvements in ConfigurationBeanLoader
- [VIVO-1248] - Add functionality to the edu.cornell.mannlib.vitro.webapp.utils.sparql package
- [VIVO-1260] - Make http.createCacheHeaders true by default
- [VIVO-1270] - Update Jena to latest release
- [VIVO-1272] - Inject JSP content to Freemarker, instead of having secondary layout
- [VIVO-1273] - Update DOI URL Schema to follow recomendations from Crossref
- [VIVO-1290] - Improve Multi-Lingual Support
- [VIVO-1294] - Language values (all.properties) should not be part of theme
- [VIVO-1307] - Remove dom4j from the project
- [VIVO-1309] - Update DWR to more recent version
- [VIVO-1317] - Reduce the number of JSON libraries in the dependencies
- [VIVO-1318] - In the ORCID client code, use Jackson library to handle JSON data
- [VIVO-1319] - Remove dependency on sourceforge.net JSON parser.
- [VIVO-1367] - AGROVOC external service not working
- [VIVO-1373] - VIVO 1.10 Beta 2 does not support FROM and FROM NAMED queries
- [VIVO-1375] - Upgrade to Servlet 3.0 spec and annotations
- [VIVO-1376] - Add smoke test to ensure that there are no XSD:Strings in SDB
- [VIVO-1377] - Add output format selection to jenatools
- [VIVO-1381] - Upgrade Solr to 4.10.4
- [VIVO-1382] - Update JFact dependency
- [VIVO-1383] - Update pooling libraries
- [VIVO-1384] - Use commons-lang3 throughout
- [VIVO-1385] - Replace unmaintained CSV parser with commons-csv
- [VIVO-1386] - Make consistent use of HttpClient 4.5, remove conflicting dependencies
- [VIVO-1387] - Update all dependencies with known vulnerabilities to latest versions
- [VIVO-1393] - Replace isotope jQuery plugin
- [VIVO-1397] - Improve performance and reliability of search indexing
- [VIVO-1400] - Have optional "precise subquery" elements in list views for triple stores that perform better with more selective queries
- [VIVO-1403] - Improve update performance
- [VIVO-1405] - Defeat browser cacheing for new versions of JavaScript and CSS files.
- [VIVO-1406] - Visualisations in a multi-lingual release
- [VIVO-1410] - Release the next version of VIVO and Vitro1408] - ConifigurationBeanLoader should recognize RDF namespaces in java: URIs
- [VIVO-1438] - Some text on Forms are made of different strings associated following english syntax
- [VIVO-1447] - Organize the ontology files. Produce a vivo.owl
- [VIVO-1448] - Move password encryption from MD5 to a salted hash
- [VIVO-1458] - Update to Jena 3.6
- [VIVO-1463] - Update ontologies.owl
- [VIVO-1470] - Improve cross-platform support in build
- [VIVO-14641478] - Identify and separate candidate ontologies for removalMySQL driver throws InvalidConnectionAttributeException
- [VIVO-14701487] - Improve cross-platform support in buildVIVO home page text -- replace scientists with scholars
- [VIVO-1488] - Read runtime.properties from {vivo-home}/config
- [VIVO-1490] - Missing '.' in aboutMapOfScience_en_US.ftl
Test
- [VIVO-1410] - Release the next version of VIVO and Vitro
- [VIVO-1496] - Add OpenVIVO and UF data to sample-data
Documentation
- [VIVO-31] - Improve documentation of Google Analytics
- [VIVO-34] - Make it easy to do "next", "previous" and "up" links in a Confluence page
- [VIVO-242] - Establish Wiki versioning process
- [VIVO-772] - Write "Preparing for Production"
- [VIVO-813] - Improve document details
- [VIVO-917] - Create a confluence macro to show sections numbers for multi-page documents
- [VIVO-1274] - Improve documentation process for next release
- [VIVO-1334] - Create a recommendation for the use of string and langString
- [VIVO-1351] - Write "TPF Endpoint" for Tech doc
- [VIVO-1352] - Complete "Using VIVO"
- [VIVO-1450] - Document the Maven 3-tier build process for upgrades
- [VIVO-1464] - Identify and separate candidate ontologies for removal
- [VIVO-1473] - Write "VIVO for Data Analysts"
- [VIVO-1485] - Add jenatools documentation to the tech wiki
- [VIVO-1495] - Data Distribution pages for the wiki
- [VIVO-1498] - Update Deploying Additional Ontologies
- [VIVO-1500] - Write "Simple Theming"
Overview
Content Tools