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Introduction

This document tells you how to install VIVO on your computer.

• The introduction explains a few concepts about VIVO, how it is

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• structured, and how it is built.
• The section entitled A simple installation describes a standard, simple installation for those who just want to get VIVO up and running.
• The section called Installation options describes several choices; some for production installations of VIVO, and some for developers who are working with VIVO on their desktops.

For information about this release, consult

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the VIVO 1.6 Release Announcement. Links to this and other documentation can be found on the support page at VIVOweb.org.

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How is VIVO distributed?

VIVO Source code

The latest release of VIVO can be found at the download page of VIVOweb.org. VIVO is distributed as source code, which you will use to build the application. This is because almost all site want to add their own customizations to VIVO.

These instructions will lead you through the process of building and installing VIVO.

Virtual appliance

VIVO is also available as a "virtual appliance", which you not need to build. We rely on the VIVO community to create new versions of the virtual appliance, so you may not find one that contains the latest release of VIVO. The latest virtual appliance can be found at the download page of VIVOweb.org.

VIVO and Vitro

VIVO is a research networking application that is built around a general-purpose RDF editor and browser named Vitro. VIVO packages Vitro with a display theme, an ontology, and many customizations. You will see references to Vitro occasionally in the installation instructions. For example, setting a property named vitro.home where you might expect to see vivo.home instead.

Remember that VIVO is a customization of Vitro.

Where will VIVO be

The section entitled A simple installation describes a standard, simple installation for those who want to get VIVO up and running. The second called Installation options section describes several choices; some are intended for a full-scale production installation of VIVO, and some are intended for a person who is developing VIVO on their own machine.

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on your computer?

Before beginning the installation, let's look at you should be aware of the four locations on your computer that will hold VIVO.

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This is created when you unpack the VIVO distribution file (see Download the VIVO source code, below). This is where you will create your build.properties file (see Specify build properties, below), and where you will make any modifications to the VIVO theme or code. You can create this wherever you choose.

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When you run the build script to compile and deploy VIVO (see Compile and deploy, below), the files will be deployed to a directory inside Tomcat. This is the actual executing code for VIVO, but you won’t need to look at it or change it. If you need to change VIVO, make the changes in the distribution directory, and run the build script again. Tell the build script where to find Tomcat by setting tomcat.home in the build.properties file (see Specify build properties, below).

The VIVO home directory

This directory contains the runtime configuration properties for VIVO. VIVO will also use this area to store some of its data. Uploaded image files are stored here, and the Solr search index is stored here also. This is also a place for the files or of RDF data that will initialize the VIVO knowledge base. You can create this wherever you choose. Tell VIVO where to find the home directory by setting vitro.home in the build.properties file (see Specify build properties, below). You must create this directory before starting VIVO. You must create the runtime.properties file in this directory (see Specify runtime properties, below), and you must ensure that Tomcat has permission to read and write to this directory when it runs.

The VIVO knowledge base

By default, nearly Nearly all of the data that you enter into VIVO will be stored in a MySQL database. The actual location of this data depends on what system you have, and on how you install MySQL (see Install required software, below). but you won’t need to know the location. You will access the data through VIVO, or occasionally through the MySQL client application.

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When you have VIVO up and running, please read the Site Administrator's Guide.

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