Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Migrated to Confluence 5.3

...

  • NB! Be extremely careful if using copy-paste! Also note that wiki page may eat some specific chars.

2 Required sofware

Install them in that order. You can find them from /usr/ports.

unmigrated-wiki-markup
Panel

lang/perl5.14
lang/python27
www/apache22
databases/postgresql91-server \
[ databases/postgresql91-contrib <\- optional, but may become handy \ ]
java/openjdk6
www/tomcat7
devel/apache-ant
www/mod_jk
devel/maven3
shells/bash

3 Configuration rollercoaster

...

Several scripts from dspace are using "/bin/bash". To make them happy:

...

Panel

    <Connector port="8080" protocol="HTTP/1.1"
                maxThreads="150"
                minSpareThreads="25"
                maxSpareThreads="75"
                enableLookups="false"
                redirectPort="8443"
                acceptCount="100"
                connectionTimeout="20000"
                disableUploadTimeout="true"
                URIEncoding="UTF-8" />

Panel

    <!-- Define an AJP 1.3 Connector on port 8009 -->
    <Connector port="8009" protocol="AJP/1.3" redirectPort="8443" URIEncoding="UTF-8" />

Once again i found more reasonable not to copy (or symlink) webapps to tomcat appBase dir as suggests dspace official documentation. Instead i'm changin tomcat appBase to point to dspace webapps. Also put tomcat logs with other www/apache logs. Original lines are commented out and my lines marked bold.

Panel

      <!-- <Host name="localhost"  appBase="webapps" -->
      <Host name="localhost"  appBase="/data/dspace/webapps"
            unpackWARs="true" autoDeploy="true">
        <!-- <Valve className="org.apache.catalina.valves.AccessLogValve" directory="logs"
               prefix="localhost_access_log." suffix=".txt"
                pattern="%h %l %u %t "%r" %s %b" /> -->
        <Valve className="org.apache.catalina.valves.AccessLogValve" directory="/var/log/apache2"
               prefix="tomcat_access." suffix=".log"
               pattern="%h %l %u %t "%r" %s %b" />

...

Some lines are omitted from output. Also configure "apache22/extra/httpd-mpm.conf" and "httpd-default.conf" to suit You. Also don't forget apache certificates.

*tcsh# egrep \ -v "#\|"^$ /usr/local/etc/apache22/httpd.conf*
/*/
LoadModule rewrite_module libexec/apache22/mod_rewrite.so
LoadModule jk_module&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; module          libexec/apache22/mod_jk.so
/*/
ErrorLog "/var/log/apache2/httpd-error.log"
/*/ &nbsp;&nbsp;&nbsp; CustomLog "\
    CustomLog "|/usr/local/sbin/rotatelogs \ -l /var/log/apache2/httpd-access_%Y-%m-%d.log 86400" combined
/*/
Include etc/apache22/extra/httpd-mpm.conf
Include etc/apache22/extra/httpd-default.conf
Include etc/apache22/extra/httpd-ssl.conf
/*/
Include etc/apache22/Includes/*.conf
NameVirtualHost \ *:80
<IfModule jk_module> &nbsp;&nbsp; &nbsp;# relative path to
    # relative path to /usr/local &nbsp;&nbsp; &nbsp;JkWorkersFile
    JkWorkersFile etc/apache22/workers.properties &nbsp;&nbsp; &nbsp;JkShmFile&nbsp;
    JkShmFile  /var/run/jk-runtime-status &nbsp;&nbsp; &nbsp;JkLogLevel error &nbsp;&nbsp; &nbsp;JkLogFile&nbsp;
    JkLogLevel error
    JkLogFile  /var/log/apache2/mod_jk.log
</IfModule>
<VirtualHost \ *:80>
ServerName dspace.example.com &nbsp;&nbsp; &nbsp;DocumentRoot
    DocumentRoot /usr/local/www/apache22/data &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; <IfModule jk_module> &nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;JkMount /xmlui localhost-worker &nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;JkMount /xmlui/\* localhost-worker &nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;JkMount /solr localhost-worker &nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;JkMount /solr/\* localhost-worker &nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;JkMount /oai localhost-worker &nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;JkMount /oai/\* localhost-worker &nbsp;&nbsp; &nbsp;</IfModule> &nbsp;&nbsp; &nbsp;RewriteEngine On &nbsp;&nbsp; &nbsp;RewriteRule \^/$ /xmlui/ \[PT\] &nbsp;&nbsp; &nbsp;RewriteRule \^/$ /solr/ \[PT\] &nbsp;&nbsp;&nbsp; RewriteRule \^/$ /oai/ \[PT\]&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; RewriteCond [http://%]\{HTTP_HOST\}%\{REQUEST_URI\}
        <IfModule jk_module>
        JkMount /xmlui localhost-worker
        JkMount /xmlui/* localhost-worker
        JkMount /solr localhost-worker
        JkMount /solr/* localhost-worker
        JkMount /oai localhost-worker
        JkMount /oai/* localhost-worker
    </IfModule>
    RewriteEngine On
    RewriteRule ^/$ /xmlui/ [PT]
    RewriteRule ^/$ /solr/ [PT]
    RewriteRule ^/$ /oai/ [PT]   
    RewriteCond http://%{HTTP_HOST}%{REQUEST_URI} (.*)-login(.*) \ [OR\] &nbsp;&nbsp; &nbsp;RewriteCond [http:]
    RewriteCond http://%]\{HTTP_HOST\}%\{REQUEST_URI\} (.*)/register(.*) \ [OR\] &nbsp;&nbsp; &nbsp;RewriteCond []
    RewriteCond http://%]\{HTTP_HOST\}%\{REQUEST_URI\} (.*)/forgot(.*) &nbsp; &nbsp;&nbsp; &nbsp;RewriteRule  
    RewriteRule (.*) [ https://%]\{HTTP_HOST\}%\{REQUEST_URI\} &nbsp;&nbsp; &nbsp;# &nbsp;&nbsp; &nbsp;CustomLog "\}
    #
    CustomLog "|/usr/local/sbin/rotatelogs \ -l /var/log/apache2/dspace.example.com-access-%Y-%m-%d.log 86400" combined &nbsp;&nbsp; &nbsp;ErrorLog combined
    ErrorLog /var/log/apache2/dspace.example.com-error.log
</VirtualHost>unmigrated-wiki-markup

*tcsh# egrep \ -v "#\|"^$ /usr/local/etc/apache22/extra/httpd-ssl.conf*
Listen 443
/*/
<VirtualHost \ _default_:443>
ServerName dspace.example.com:443
ServerAdmin hostmaster@example.com
DocumentRoot "/usr/local/www/apache22/data"
<IfModule jk_module> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; JkMount /xmlui localhost-worker &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; JkMount /xmlui/\* localhost-worker &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; JkMount /solr localhost-worker &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; JkMount /solr/\* localhost-worker &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; JkMount /oai localhost-worker &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; JkMount /oai/\* localhost-worker &nbsp;&nbsp; &nbsp;RewriteEngine On &nbsp;&nbsp; &nbsp;RewriteRule \^/$ /xmlui/ \[PT\] &nbsp;&nbsp; &nbsp;RewriteRule \^/$ /solr/ \[PT\] &nbsp;&nbsp; &nbsp;RewriteRule \^/$ /oai/ \[PT\] </IfModule> ErrorLog "\
        JkMount /xmlui localhost-worker
        JkMount /xmlui/* localhost-worker
        JkMount /solr localhost-worker
        JkMount /solr/* localhost-worker
        JkMount /oai localhost-worker
        JkMount /oai/* localhost-worker
    RewriteEngine On
    RewriteRule ^/$ /xmlui/ [PT]
    RewriteRule ^/$ /solr/ [PT]
    RewriteRule ^/$ /oai/ [PT]
</IfModule>
ErrorLog "|/usr/local/sbin/rotatelogs /var/log/apache2/https-error-%Y-%m-%d.log 5M"
TransferLog "\|/usr/local/sbin/rotatelogs /var/log/apache2/https-access-%Y-%m-%d.log 86400"
/*/
SSLCertificateFile "/usr/local/etc/apache22/certs/dspace.example.com.crt"
SSLCertificateKeyFile "/usr/local/etc/apache22/certs/dspace.example.com.key"
SSLCertificateChainFile "/usr/local/etc/apache22/certs/dspace-bundle.example.com.crt"
/*/
<Directory "/data/dspace/webapps/xmlui"> &nbsp;&nbsp;&nbsp; SSLOptions \+StdEnvVars \+ExportCertData
    SSLOptions +StdEnvVars +ExportCertData
</Directory>

Panel

Wiki Markup

4 Install Dspace

Panel

tcsh# mkdir /data/dspace
tcsh# cd /data
tcsh# fetch -o dspace-1.8.1-src-release.tar.gz *http://sourceforge.net/projects/dspace/files/DSpace%20Stable/1.8.1/dspace-1.8.1-src-release.tar.gz/download\* (http://sourceforge.net/projects/dspace/files/DSpace%20Stable/1.8.1/dspace-1.8.1-src-release.tar.gz/download*)
tcsh# tar xzf dspace-1.8.1-src-release.tar.gz
tcsh# cd /data/dspace-1.8.1-src-release/dspace/config/

...

And finally set proper permissons:

Panel

tcsh# chown -R www:www /data/dspace

Just in case verify /data/dspace/config/log4j.properties doesn't bug You.  Remove unneeded "/" There may be 3 erratic lines like this one:

Panel

/var/log/apache2/*/*cocoon.log

Also verify that /data/dspace/config/modules/authentication.cfg and authentication-ldap.cfg are correct.

...

Now install certificates required to use LDAPS. Make sure that You have JAVA_HOME set:

unmigrated-wiki-markup
Panel

*tcsh# set JAVA_HOME=/usr/local/openjdk6* *
tcsh# echo $JAVA_HOME*
/usr/local/openjdk6 *
tcsh# keytool \ -import \ -file /tmp/myldap-clients.example.com.crt \ -alias myldap.example.com \ -keystore $JAVA_HOME/jre/lib/security/cacerts*
Enter keystore password:&nbsp;   'changeit'&nbsp;&nbsp; <\- by default without    <- by default without '-es\!
/*/
Trust this certificate? \ [no\]:&nbsp; *yes* Certificate was added to keystore *tcsh# keytool \-list \-keystore   yes
Certificate was added to keystore
tcsh# keytool -list -keystore $JAVA_HOME/jre/lib/security/cacerts* *
tcsh# rm \ -f /tmp/olp-wildmyldap-clients.example.com.crt*

5 Handle

If You are using "handle" also, then:

Panel

tcsh# /data/dspace/bin/dspace make-handle-config /data/dspace/handle-server

Create /usr/local/etc/rc.d/handle with following content. This script runs handle service as "www" user.

Panel

#!/bin/sh
#
# PROVIDE: handle
# REQUIRE: NETWORKING tomcat7
# KEYWORD: shutdown
#
# handle_server_enable="YES"
#

. /etc/rc.subr

name="handle_server"
start_cmd="${name}_start"
stop_cmd="${name}_stop"
rcvar=`set_rcvar`

command="/data/dspace/bin/start-handle-server"unmigrated-wiki-markup

handle_server_start() \{ &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; if \[ \-x $\{command\} \]; then &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
{
        if [ -x ${command} ]; then
        pid="`ps \ -axuwww \| grep \| grep -v grep \ | grep handle-server \ | nawk '\{ print $2 \ }'`" &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; if \[ "$\{pid\}"X = "X" \]; then &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; su - www \-c $\{command\} &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; else &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; echo "Handle server is already running." &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; fi &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; fi \} handle_server_stop() \{ &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; pid="`ps \-axuwww \| grep \-v grep \| grep handle-server \| nawk '\{ print $2 \}'`" &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; if \[ "$\{pid\}"X \!= "X" \]; then &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; pid_owner="`ps \-axu \|grep \-v grep \| grep \-w $pid \|nawk '\{ print $1 \}'`" &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; if \[ "$\{pid_owner\}" = "www" \]; then &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; kill \-15 $\{pid\} &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sleep 1 &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; fi &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; else &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; echo "Handle server is not running?" &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; fi \} \# set
                if [ "${pid}"X = "X" ]; then
                        su - www -c ${command}
                else
                        echo "Handle server is already running."
                fi
        fi
}
handle_server_stop()
{
        pid="`ps -axuwww | grep -v grep | grep handle-server | nawk '{ print $2 }'`"
        if [ "${pid}"X != "X" ]; then
                pid_owner="`ps -axu |grep -v grep | grep -w $pid |nawk '{ print $1 }'`"
                if [ "${pid_owner}" = "www" ]; then
                        kill -15 ${pid}
                        sleep 1
                fi
        else
                echo "Handle server is not running?"
        fi
}
# set defaults

handle_server_enable=${handle_server_enable:-"NO"}
load_rc_config "${name}"

run_rc_command "$1"

...

Panel

apache22_enable="YES"
tomcat7_enable="YES"
tomcat7_java_opts="-Xmx512M -Xms512M -XX:MaxPermSize=128M -Dfile.encoding=UTF-8"
tomcat7_catalina_log=">> /var/log/apache2/catalina-`date +%Y-%m-%d`.log 2>&1"
tomcat7_catalina_tmpdir="/tmp"
handle_server_enable="YES"
postgresql_enable="YES"
postgresql_data="/data/pgsql"

...

  • If You should later on upgrade "openjdk", then You need to import LDAP certificate again - you'll lose it!
  • If You should upgrade mod_jk port, then dont forget to uncomment "#LoadModule jk_module.... " line!
  • After dspace upgrade dont forget cocoon: /data/dspace/webapps/xmlui/WEB-INF/cocoon/properties/core.properties
  • Implement backups and monitoring!
  • Implement firewall. If using pf:

...