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To restore VIVO to first time state, simply drop the MySQL database and recreate it.  See below.

Code Block
$ mysql -u root -p
Welcome to the MySQL monitor.  Commands end with ; or \g.
Your MySQL connection id is 2
Server version: 5.7.9 MySQL Community Server (GPL)
Copyright (c) 2000, 2015, Oracle and/or its affiliates. All rights reserved.
Oracle is a registered trademark of Oracle Corporation and/or its
affiliates. Other names may be trademarks of their respective
owners.
Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.
 
mysql> DROP DATABASE vitrodb
mysql> CREATE DATABASE vitrodb CHARACTER SET utf8;
mysql> GRANT ALL ON vitrodb.* TO 'vitrodbUsername'@'localhost' IDENTIFIED BY 'vitrodbPassword';