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The capability map is only linked to from the menu bar. As this is configured through the triple store, and the initial definitions are in a file that only gets loaded the first time VIVO is run, upgrading applications will not have the link present.

To access the capability map in an upgraded VIVO, you need to browse to the following url path:

<vivo>/vis/capabilitymap

This can be added to an existing application's menu bar via the Site Admin pages. See 'Upgrading VIVO' for details.