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If empty, read the files in /WEB-INF/ontologies/app/ (without subdirectories)

• In Vitro, application.owl, menu.n3, profilePageType.n3
• In VIVO, override menu.n3
  

Every time, read /WEB-INF/ontologies/app/loadedAtStartup

• in Vitro, displayModelListViews.rdf
• In VIVO, homePageDataGetters.n3, localeSelectionGUI.n3, vivoDepartmentQueries.n3, vivoListViewConfig.rdf, vivoSearchProhibited.n3
  

User Accounts

Name: http://vitro.mannlib.cornell.edu/default/vitro-kb-userAccounts

...

If empty, read the files in /WEB-INF/ontologies/auth (without subdirectories). None expected, except during Selenium tests.

Application metadata

Name: http://vitro.mannlib.cornell.edu/default/vitro-kb-applicationMetadata

Source: the application Datasource (MySQL database)

  If empty, this is first setup

If first setup, read the files in /WEB-INF/init-data (without subdirectories)

• None in Vitro
• initialSiteConfig.rdf in VIVO

If first setup, read the files in /WEB-INF/ontologies/user/applicationMetadata

Content

base ABox

Name: http://vitro.mannlib.cornell.edu/default/vitro-kb-2

Source: startup dataset from RDFService

If first setup, read the files in /WEB-INF/ontologies/user/abox (without subdirectories)

• None in Vitro
• In VIVO, geopolitical.ver1.1-11-18-11.individual-labels.rdf, vocabularySource-labels.n3

inference ABox

Name: http://vitro.mannlib.cornell.edu/default/vitro-kb-inf

Source: startup dataset from RDFService

base TBox

Name: http://vitro.mannlib.cornell.edu/default/asserted-tbox

Source: startup dataset from RDFService (memory-mapped)

If first setup, read the files in /WEB-INF/ontologies/user/tbox (without subdirectories)

• In Vitro, none
• In VIVO, geopolitical-ver1.1-11-18-11-annotations.rdf, isDefinedBy-1.5-annotations.rdf, scires-1.5-annotations.rdf, vitro-0.7-annotations.rdf, vivo-core-1.5-annotations.rdf, vivo-core-1.5-labels_es_ES.n3

inference TBox

Name: http://vitro.mannlib.cornell.edu/default/inferred-tbox

Source: startup dataset from RDFService (memory-mapped)

union ABox

Source: union of base ABox and inference ABox

union TBox

Source: union of base TBox and inference TBox

The ModelAccess class

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